| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3254 |
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| Symbol | |
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| ID | 3368781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3899067 |
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| End bp | 3900752 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653605 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_236324 |
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| Protein GI | 66046483 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0445777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGA TGAACCAACT GATCATCGCG CCCATCCTGC TGCCGCTGCT GACCGCCGGG
CTGATGCTCT GGCTGGGCGA AAAGCACCGG CCGCTCAAGG GCCGTATCAA TCTGTTTTCC
AGCATCCTCG GGCTGGGCAT TTCCGTAGCG CTGTTTCTCT GGGTGCAACA CAGCGGCAGC
AGCGGCTCGA TCGGTGTCTA TCTGCCGGGC AACTGGGGCG TGCCGTTCGG CATCGTGCTG
GTGGTGGACC ACCTGTCAGC GATGATGCTG GTGCTGACCG GGATCGTCGG GGTCTGCGCC
CTGCTGTTCG CGCTGGCTCG CTGGGACAGG GCCGGTGCCA GCTTCCATGC GCTGTTCCAG
ATCCAGCTCA TGGGGCTGTA CGGTGCGTTC CTGACCGCTG ACCTGTTCAA CCTGTTCGTG
TTCTTCGAAG TACTGCTCGC AGCGTCCTAC GGCTTGATGT TGCATGGCTC TGGCCGGGCA
AGGGTGTCGA CGGGGCTGCA TTACATTTCG ATCAACCTGC TGGCTTCGTC GTTGTTTCTG
ATCGGTGCTG CGTTGATTTA CGGGGTGACC GGCACGCTGA ACTTTGCCGA TCTGGCCATC
AAGATCCTGC AGGTGGCGGA GTCCGATCTG GGCCTGCTGC ATGCCGGAGC TGCGATTCTG
GCCACGGCGT TCCTGGCCAA GGCCGGCATG TGGCCGCTGA ACTTCTGGCT GGTTCCCGCC
TACTCGGCAG CCAGCGCGCC GGTAGCGGCA ATGTTTGCGA TCATGACCAA AGTGGGTGTC
TATACCCTGC TACGCCTGTG GACCCTGCTG TTTTCCGGTC AGGCCGGTGC CTCGGCATTC
TTCGGCGGCG ACTGGCTGAT CTACGGCGGC ATGGCGACGA TTTTCACCGC GGCCATCGCC
ATCATCGCCG CCCAGCGCCT GGAGCGCCTC GCCAGCCTGA GCATACTGGT GTCAGCGGGC
ATTCTGCTGT CCGCCGTCGG CTTCGCCCAG CCGAGCCTGA CCTCGGGCGC GCTGTTCTAT
ATGGTCAGCT CGACGCTGGC ATTGAGCGCC ATGTTTCTGC TGGGCGAACT GATCGAACGC
TCCCGCTCGG CCAACGAGAT CCCACTGGAA TACGACGTAG ATCAATTGCC TCGTACCCTG
GAGTCCCTGC ATCCGCCGCC CGGTGCCAAC CTGGACGACG AACAGAAGGT CGTGGTCGGT
CAGGTCATTC CCATGACCAT GGCTTTTCTG GGCCTGAGTT TTATCGCCTG CGCCTTGCTG
ATCATCGGCA TGCCGCCGCT CTCGGGATTC ATCGGCAAGC TCACCTTGAT CAGCGCGCTG
ATGAACCCGC TGGGGCTGGA CGTCGCGAAG GATGAGGCGC TTTCCACTCA GGCATGGATG
CTGATCGGCC TGCTGATTTT TTCCGGGCTG GCGTCGCTGA TCGCTTTTTC AAGGCTCGGC
ACGCAACGTT TCTGGACGCC ACACGAGCGC CCTTCGCCGA TGCTGCGTCG CAACGAATGC
CTGCCGATCA TCATTCTTCT GGGTCTGTGC ATCGCGCTGA CCTTCAAGGC CGAACCCTTG
TTGCGCTACA CCCAGGACAC CGCCGCAGCG CTGCATGAGC CCAAACAGTA TGTGCAGTCA
GTGCTCGCCA CACGCCCGAT ACCCGGCCCC ACCAGCCAGC AAGCAGATCC GGAGGAGCAG
CCATGA
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| Protein sequence | MSWMNQLIIA PILLPLLTAG LMLWLGEKHR PLKGRINLFS SILGLGISVA LFLWVQHSGS
SGSIGVYLPG NWGVPFGIVL VVDHLSAMML VLTGIVGVCA LLFALARWDR AGASFHALFQ
IQLMGLYGAF LTADLFNLFV FFEVLLAASY GLMLHGSGRA RVSTGLHYIS INLLASSLFL
IGAALIYGVT GTLNFADLAI KILQVAESDL GLLHAGAAIL ATAFLAKAGM WPLNFWLVPA
YSAASAPVAA MFAIMTKVGV YTLLRLWTLL FSGQAGASAF FGGDWLIYGG MATIFTAAIA
IIAAQRLERL ASLSILVSAG ILLSAVGFAQ PSLTSGALFY MVSSTLALSA MFLLGELIER
SRSANEIPLE YDVDQLPRTL ESLHPPPGAN LDDEQKVVVG QVIPMTMAFL GLSFIACALL
IIGMPPLSGF IGKLTLISAL MNPLGLDVAK DEALSTQAWM LIGLLIFSGL ASLIAFSRLG
TQRFWTPHER PSPMLRRNEC LPIIILLGLC IALTFKAEPL LRYTQDTAAA LHEPKQYVQS
VLATRPIPGP TSQQADPEEQ P
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