Gene Psyr_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3187 
Symbol 
ID3368709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3816926 
End bp3817807 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID637653533 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_236257 
Protein GI66046416 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.162983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTG ATGATGCTTT CCGCGTGACG TTTCACACTC AGCAGGTAGG AGACGTAAAT 
GTGTTCTATC GCGAAGTCGG ACCCAGGGAC GCCCCGGTGC TTCTGCTGCT CCATGGGTTT
CCGAGTTCCA GCCACATGTT TCGTGACCTG ATGCCATTGT TGGCGAGTCA GTACCGCCTG
ATCGCTCCCG ATCTGCCCGG TTTCGGCAAT ACCAAAGCAC CACCGCGCGG GCAGTTCGAT
TACACATTCG AAAACCTTTA CACGGTGATC GAGGGCTTTA CCGAGGCACT GGGCCTGAAG
AAATACGCGT TATACCTATT CGACTATGGC GCACCGACAG GCTTGCGGCT CGCAGCGGCG
AACCCGGAGA AGGTTACTGC AATCATCAGT CAGAACGGCA ATGCCTATCT GGAAGGATTC
AGCGATCAAT GGGGCCCGTG GCAAGCCTAT TGGCGCGAGC CTTCGGCAGC CAATCGCGAA
GCCTGTCGCG CCTCGTTGTC ACCGCAAGTC ATCCGGGACT GGCAATACGG TACGGGAGCC
GATCCTGAAA AGCTTTCTCC CGATGGCTAC AACCTCGACA TCCTGTATAT GGCGCGGCCG
GGCGCAGAGG AAATCCAGCT TGACCTGATT CTTGACTACC GCAGTAACGT AGCGGCTTAC
CCCTCGTTTC AGGAATACCT GCGCAAATAT CAGCCTCCCT TGCTGGCGGT CTGGGGCAAG
CACGATCCGG CGTTTATACC TCCGGGCGCG CATGCTTATC GCAAGGACGT CCCGGCTGCT
GAGGTGCATC TGCTGGATGC AGGCCACTTT GCATTGGAAA CACACGCGCC GGAGGTCGCC
GAATACATTC GCGACTTTCT TTCGCGCACG CTGAAAGGCT GA
 
Protein sequence
MNSDDAFRVT FHTQQVGDVN VFYREVGPRD APVLLLLHGF PSSSHMFRDL MPLLASQYRL 
IAPDLPGFGN TKAPPRGQFD YTFENLYTVI EGFTEALGLK KYALYLFDYG APTGLRLAAA
NPEKVTAIIS QNGNAYLEGF SDQWGPWQAY WREPSAANRE ACRASLSPQV IRDWQYGTGA
DPEKLSPDGY NLDILYMARP GAEEIQLDLI LDYRSNVAAY PSFQEYLRKY QPPLLAVWGK
HDPAFIPPGA HAYRKDVPAA EVHLLDAGHF ALETHAPEVA EYIRDFLSRT LKG