| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3150 |
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| Symbol | |
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| ID | 3368671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3773948 |
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| End bp | 3775150 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653495 |
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| Product | type II secretion system protein |
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| Protein accession | YP_236220 |
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| Protein GI | 66046379 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT TCAAGTACCG CGCGCTGGAT GCTCAGGGCG CGCCGCAGAA TGGCACGCTG
GAAGCCCGCG ATCAGGATGC CGCCATTGCC GCGTTGCAGA AGCGTGGCCT GATGGTCCTG
CAGGTCGATG CCGCCGGTCT GGGCGGTTTG CGCCGTGCGC TGGGCAGCGG CTTGCTCAAT
GGTGCGGCGC TGGTCAGCTT CACCCAGCAG CTCGCGACGT TGCTCGGCGC CGGGCAACCG
TTGGAACGAT CGCTTGGAAT TCTGCTCAAA CAGCCTGGAC AACCGCAGAC CAAGGCGTTG
ATCGAGCGCA TCCGCGAACA GGTCAAGGCT GGCAAGCCGC TGTCCGTGGC GCTCGAAGAA
GAGGGCAGCC AGTTCTCGCC CCTCTATATA AGCATGGTCC GCGCCGGTGA AGCCGGTGGC
GCACTGGAAA GTACGCTGCG CCAACTGAGC GATTACCTGG AGCGCAGCCA GTTGCTGCGT
GGCGAGGTGA TCAACGCGCT GATCTATCCG GCCTTTCTGG TAGTGGGTGT GTTGGGTTCC
CTGGCGCTGT TGCTGGCCTA CGTCGTGCCG CAATTCGTAC CGATCTTCAA GGATCTCGGT
GTGCCGATTC CATTGATTAC CGAGGTCATT CTCAACCTCG GAGAGTTTTT GAGCGACTAC
GGGCTGGCGG TGCTGGCGGG CCTGATCGCG TTGATCTGGG GCATGGCCAT TCGCATGCGC
GACCCGCAGC GTCGCGAGCG CCGTGATCGC CGTCTGCTGG GCATTCGGGT GATCGGTCCT
TTATTGCAAC GCATTGAGGC AGCACGGCTG ACGCGCACCC TCGGTACGCT TTTGACCAAT
GGAGTGGCGT TGTTGCAGGC GCTGGTGATC GCTCGCCAGG TCTGCACCAA TCGTGCCCTG
CAGGCGCAGG TCGAGCAGGC GGCCGAGTCG GTCAAGGGTG GCGGCACGCT GGCCAGCGCG
TTTGGTGCGC AGCCGTTGTT GCCGGATCTG GCTCTGCAAA TGATCGAGGT CGGCGAACAG
GCTGGCGAAC TGGACACCAT GCTGATGAAG GTCGCCGATG TGTTCGACGT CGAGGCCAAG
CGCGGTATCG ACCGCATGCT GGCCGCACTC GTGCCGGCGC TGACGGTGGT GATGGCGGGC
ATGGTCGCGG TGATCATGCT GGCCATCATG CTGCCGCTGA TGAGCCTGAC CAGCAATATC
TGA
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| Protein sequence | MSLFKYRALD AQGAPQNGTL EARDQDAAIA ALQKRGLMVL QVDAAGLGGL RRALGSGLLN
GAALVSFTQQ LATLLGAGQP LERSLGILLK QPGQPQTKAL IERIREQVKA GKPLSVALEE
EGSQFSPLYI SMVRAGEAGG ALESTLRQLS DYLERSQLLR GEVINALIYP AFLVVGVLGS
LALLLAYVVP QFVPIFKDLG VPIPLITEVI LNLGEFLSDY GLAVLAGLIA LIWGMAIRMR
DPQRRERRDR RLLGIRVIGP LLQRIEAARL TRTLGTLLTN GVALLQALVI ARQVCTNRAL
QAQVEQAAES VKGGGTLASA FGAQPLLPDL ALQMIEVGEQ AGELDTMLMK VADVFDVEAK
RGIDRMLAAL VPALTVVMAG MVAVIMLAIM LPLMSLTSNI
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