Gene Psyr_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3126 
Symbol 
ID3368647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3748593 
End bp3749528 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID637653471 
Producttransporter, putative 
Protein accessionYP_236196 
Protein GI66046355 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.598525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACG AAGTAGATGG CAAGACCCCC GGCCTGTCAG CCGAGGAAGA GCGCGAGATC 
GATGAGAACC AGCCGCCCCG CGCGGCGGTG TTGCACGAAA CCATTCGCAT GCAGGGCGAC
CACGAACTGG AGCGCAGCGT AGCCGCGCTG TGGTGGTCGG CATTGGCTGC AGGACTGACC
ATGGGCCTGT CGCTGATGGC GATGGGTTTG CTGAACTCGC GCCTCGAAGG CATCCCCGGC
AGTCATGTGA TCAGCAGCCT CGGCTATTCG GCAGGGTTTC TGGCGGTGAT CCTGGCGCGT
CAGCAACTGT TCACGGAAAA CACCATCACA GCTGTGCTGC CGGTCATGAG CAAGCTGAAC
CTGGCCAACA TCGGGCGGCT GCTGCGCTTG TGGGGTGTGG TTCTGACCGG CAACCTGGTC
GGCACGCTGA CGGTGGCCTA TGTCATGCTC AACCTGCCGA TTTTCGATAC CAGCACCGAC
AAGGCGTTTC TGGAAATTGG CCACAAGGTT ATGGAAAACG ACATGGCCCA GATGTTTTCC
AAGGGGATCG TCTCGGGCTG GATGATTGCG ACCATGGTCT GGATGATCGC GTCGATGGAA
AACGCCAAGA TAGCGATCAT TGTGCTGATC ACCTACCTGA TGGCGCTCGG CGACTTCACG
CACATCGTGG TGGGTTCGGC CGAAGTATCC TATCTTGTAT TCGCTGGTGA GCTGGGCTGG
AAGGATTTCT GGTTCGCTTT TGCAGGCCCC ACCCTGGCAG GCAACATTAT CGGTGGCAGT
TTTATTTTCG CCTTGATCAG CCATGCGCAG ATCCGCAGTG AAAAAGACAC CACAGAGAAA
ATGGAGCGCG ACCGCAAAAA CAAGGAAGAA AAACGTCGCC TGGAGAAAGC GCAAAAGCTC
AAGGAAGCGG ATTCCACGGC AAAGCGAGAA ATATGA
 
Protein sequence
MDHEVDGKTP GLSAEEEREI DENQPPRAAV LHETIRMQGD HELERSVAAL WWSALAAGLT 
MGLSLMAMGL LNSRLEGIPG SHVISSLGYS AGFLAVILAR QQLFTENTIT AVLPVMSKLN
LANIGRLLRL WGVVLTGNLV GTLTVAYVML NLPIFDTSTD KAFLEIGHKV MENDMAQMFS
KGIVSGWMIA TMVWMIASME NAKIAIIVLI TYLMALGDFT HIVVGSAEVS YLVFAGELGW
KDFWFAFAGP TLAGNIIGGS FIFALISHAQ IRSEKDTTEK MERDRKNKEE KRRLEKAQKL
KEADSTAKRE I