Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3126 |
Symbol | |
ID | 3368647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3748593 |
End bp | 3749528 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637653471 |
Product | transporter, putative |
Protein accession | YP_236196 |
Protein GI | 66046355 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.598525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCACG AAGTAGATGG CAAGACCCCC GGCCTGTCAG CCGAGGAAGA GCGCGAGATC GATGAGAACC AGCCGCCCCG CGCGGCGGTG TTGCACGAAA CCATTCGCAT GCAGGGCGAC CACGAACTGG AGCGCAGCGT AGCCGCGCTG TGGTGGTCGG CATTGGCTGC AGGACTGACC ATGGGCCTGT CGCTGATGGC GATGGGTTTG CTGAACTCGC GCCTCGAAGG CATCCCCGGC AGTCATGTGA TCAGCAGCCT CGGCTATTCG GCAGGGTTTC TGGCGGTGAT CCTGGCGCGT CAGCAACTGT TCACGGAAAA CACCATCACA GCTGTGCTGC CGGTCATGAG CAAGCTGAAC CTGGCCAACA TCGGGCGGCT GCTGCGCTTG TGGGGTGTGG TTCTGACCGG CAACCTGGTC GGCACGCTGA CGGTGGCCTA TGTCATGCTC AACCTGCCGA TTTTCGATAC CAGCACCGAC AAGGCGTTTC TGGAAATTGG CCACAAGGTT ATGGAAAACG ACATGGCCCA GATGTTTTCC AAGGGGATCG TCTCGGGCTG GATGATTGCG ACCATGGTCT GGATGATCGC GTCGATGGAA AACGCCAAGA TAGCGATCAT TGTGCTGATC ACCTACCTGA TGGCGCTCGG CGACTTCACG CACATCGTGG TGGGTTCGGC CGAAGTATCC TATCTTGTAT TCGCTGGTGA GCTGGGCTGG AAGGATTTCT GGTTCGCTTT TGCAGGCCCC ACCCTGGCAG GCAACATTAT CGGTGGCAGT TTTATTTTCG CCTTGATCAG CCATGCGCAG ATCCGCAGTG AAAAAGACAC CACAGAGAAA ATGGAGCGCG ACCGCAAAAA CAAGGAAGAA AAACGTCGCC TGGAGAAAGC GCAAAAGCTC AAGGAAGCGG ATTCCACGGC AAAGCGAGAA ATATGA
|
Protein sequence | MDHEVDGKTP GLSAEEEREI DENQPPRAAV LHETIRMQGD HELERSVAAL WWSALAAGLT MGLSLMAMGL LNSRLEGIPG SHVISSLGYS AGFLAVILAR QQLFTENTIT AVLPVMSKLN LANIGRLLRL WGVVLTGNLV GTLTVAYVML NLPIFDTSTD KAFLEIGHKV MENDMAQMFS KGIVSGWMIA TMVWMIASME NAKIAIIVLI TYLMALGDFT HIVVGSAEVS YLVFAGELGW KDFWFAFAGP TLAGNIIGGS FIFALISHAQ IRSEKDTTEK MERDRKNKEE KRRLEKAQKL KEADSTAKRE I
|
| |