Gene Psyr_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3111 
Symbol 
ID3368632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3728244 
End bp3729146 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID637653456 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236181 
Protein GI66046340 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGC GTGATCTCAC CTATTTCGAA ACTATTGCCG AACTGGGGCA TCTCGGACGG 
GCTGCGGAGA AGCTCAATCG CAGCCAGCCA GCGCTGACCA AAAGCATTCA GCGCCTTGAG
GAATCATTCG GCACGCGACT GTTTCAGCGT GACGGCCGAC GCATCAAGTT GACGCCCGTG
GGCGAGCTGC TCCAGGCGCG TGGCAAGGAA TTGCAGCAAA GCATCGCCCA GACCCAGCGC
GAGATTCGGG ATTTCGCCAG TGGCATGGTG GGCAACATAC GGGTCGGCTG CGCTGCGACG
ATGGCGGAAT ACCTGATGCC GAAACTGACT TCGGCCTTGT TGCAGCGTAC CCCGGACGTC
ACCTTGAAGC TGGTGATAGG TCAGGATGAC CTGCTGCGCG AATCGTTGCG CTCCGGTCAG
CTGGACATGA TCATTTGCGC GCTGGCGCCC GACAGCGAAG ACGTCACCAG CTTCGCCATA
CTGCAGGACG AAGCTGTGGT GGTCGCCAGC AAGAATCATC CGATTTTCAA GCCGTCGTTG
AAGATGAGTG ACCTGTGCGC GTATCGCTGG GTACTGCCGC CGGTGAGTGT TTCATCGCGC
AAATGGCTCG ACGCGACCTT CGCCGCTCAC GGCCTGCCGC TGCCGACGGT GCAGATCGAA
GCGAATTCGA TCTCGCTGCT GCCGGGGCTG ATTGCCCGCA GCAACCTGTT GAGCTTCATT
GCCCGCGAGT CGCTGGAGTT CGGCAAGACC ATGCAGCACC TGCGCGAGGT GCCGCTCGAG
CAGACCACCC TCAAACGCAC CATTGGTGTG ACGTTGCGCA AGGGCGGTTA TCTGTCTCCT
GCGGCAGAAG GCATGTTGCA GATGCTGCGC GACAACGGCG GGGACTTTCG GGGTTGGGGC
TGA
 
Protein sequence
MDLRDLTYFE TIAELGHLGR AAEKLNRSQP ALTKSIQRLE ESFGTRLFQR DGRRIKLTPV 
GELLQARGKE LQQSIAQTQR EIRDFASGMV GNIRVGCAAT MAEYLMPKLT SALLQRTPDV
TLKLVIGQDD LLRESLRSGQ LDMIICALAP DSEDVTSFAI LQDEAVVVAS KNHPIFKPSL
KMSDLCAYRW VLPPVSVSSR KWLDATFAAH GLPLPTVQIE ANSISLLPGL IARSNLLSFI
ARESLEFGKT MQHLREVPLE QTTLKRTIGV TLRKGGYLSP AAEGMLQMLR DNGGDFRGWG