Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3111 |
Symbol | |
ID | 3368632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3728244 |
End bp | 3729146 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653456 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236181 |
Protein GI | 66046340 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC GTGATCTCAC CTATTTCGAA ACTATTGCCG AACTGGGGCA TCTCGGACGG GCTGCGGAGA AGCTCAATCG CAGCCAGCCA GCGCTGACCA AAAGCATTCA GCGCCTTGAG GAATCATTCG GCACGCGACT GTTTCAGCGT GACGGCCGAC GCATCAAGTT GACGCCCGTG GGCGAGCTGC TCCAGGCGCG TGGCAAGGAA TTGCAGCAAA GCATCGCCCA GACCCAGCGC GAGATTCGGG ATTTCGCCAG TGGCATGGTG GGCAACATAC GGGTCGGCTG CGCTGCGACG ATGGCGGAAT ACCTGATGCC GAAACTGACT TCGGCCTTGT TGCAGCGTAC CCCGGACGTC ACCTTGAAGC TGGTGATAGG TCAGGATGAC CTGCTGCGCG AATCGTTGCG CTCCGGTCAG CTGGACATGA TCATTTGCGC GCTGGCGCCC GACAGCGAAG ACGTCACCAG CTTCGCCATA CTGCAGGACG AAGCTGTGGT GGTCGCCAGC AAGAATCATC CGATTTTCAA GCCGTCGTTG AAGATGAGTG ACCTGTGCGC GTATCGCTGG GTACTGCCGC CGGTGAGTGT TTCATCGCGC AAATGGCTCG ACGCGACCTT CGCCGCTCAC GGCCTGCCGC TGCCGACGGT GCAGATCGAA GCGAATTCGA TCTCGCTGCT GCCGGGGCTG ATTGCCCGCA GCAACCTGTT GAGCTTCATT GCCCGCGAGT CGCTGGAGTT CGGCAAGACC ATGCAGCACC TGCGCGAGGT GCCGCTCGAG CAGACCACCC TCAAACGCAC CATTGGTGTG ACGTTGCGCA AGGGCGGTTA TCTGTCTCCT GCGGCAGAAG GCATGTTGCA GATGCTGCGC GACAACGGCG GGGACTTTCG GGGTTGGGGC TGA
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Protein sequence | MDLRDLTYFE TIAELGHLGR AAEKLNRSQP ALTKSIQRLE ESFGTRLFQR DGRRIKLTPV GELLQARGKE LQQSIAQTQR EIRDFASGMV GNIRVGCAAT MAEYLMPKLT SALLQRTPDV TLKLVIGQDD LLRESLRSGQ LDMIICALAP DSEDVTSFAI LQDEAVVVAS KNHPIFKPSL KMSDLCAYRW VLPPVSVSSR KWLDATFAAH GLPLPTVQIE ANSISLLPGL IARSNLLSFI ARESLEFGKT MQHLREVPLE QTTLKRTIGV TLRKGGYLSP AAEGMLQMLR DNGGDFRGWG
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