Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3082 |
Symbol | |
ID | 3368602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3687828 |
End bp | 3688676 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653426 |
Product | MltA-interacting MipA |
Protein accession | YP_236152 |
Protein GI | 66046311 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0343069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCTG CAATCTCTCG TACTCACCTG CGCTCTGCGC TGCTTAAACC TGTGCTGACC GTGTTGATCA CCTCTGCGGC CATGACCCTG GCCGGTCAGG CCTGCGCGCA GGACAGCACT GCTCAAGGCC AATCGATGCT GGGTGACAGG TTCAACGTCA ATTTCGGACT CGGCATGGCC GTGCTGCCGC GCTACATGGG GGCTGATGAA TACCGCAGTC AGGTGGTGCC CATGCTGACG GTCCAGCGTG GCATCTTCTT CGCCGACACC ACGCGCGGTC TGGGGCTGCA ATGGCAGTCG GATTCCGGGT TCGGTGCCAG CGCTGCACTC AATTACGATT TCGGTCGTAC CGAGAAAAAC AGTACGAATC GGCCTGGTTC CAACGAGCTG ATAGGGATGG GTACCGTCAA GGGCGCGACC GTTGGCGACT TCATGGTTTC TCAGCAACTC ATGCCGTGGC TGTCCGTCAG TGCCGAGGCC GAACTGCGGG TGGCTGGCGA ACAACGTGGC AATCGCTATC GGTTGGGCTT CGAGGGCATC GCTTATCACA GCCAGACCGA CACGGTGACC CTCGACATTG ATGCGCACGC CGGTGACGGT CGTTACAACC AGACCTATTT CGGCGTGAGT CCGATTCAGA GTCAGCGCAC CGGCTTCTCC CGTTTCAACG CAGACAGCGG CATTTACGCG TACTCGGCGG CGCTCGCCTG GCAGCATACC TTCGACGCCC ACTGGTCAAC CGTCGCAAGC GTCGGGGTGA CGCACTACAC CGACCAGACC CGGGGCAGCC CGTTGGTCGA GACCGATGCC GAAGGCAGTG GCCTGATTGC CTTGAATTAC GCTTTCTGA
|
Protein sequence | MSPAISRTHL RSALLKPVLT VLITSAAMTL AGQACAQDST AQGQSMLGDR FNVNFGLGMA VLPRYMGADE YRSQVVPMLT VQRGIFFADT TRGLGLQWQS DSGFGASAAL NYDFGRTEKN STNRPGSNEL IGMGTVKGAT VGDFMVSQQL MPWLSVSAEA ELRVAGEQRG NRYRLGFEGI AYHSQTDTVT LDIDAHAGDG RYNQTYFGVS PIQSQRTGFS RFNADSGIYA YSAALAWQHT FDAHWSTVAS VGVTHYTDQT RGSPLVETDA EGSGLIALNY AF
|
| |