Gene Psyr_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3082 
Symbol 
ID3368602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3687828 
End bp3688676 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID637653426 
ProductMltA-interacting MipA 
Protein accessionYP_236152 
Protein GI66046311 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0343069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTG CAATCTCTCG TACTCACCTG CGCTCTGCGC TGCTTAAACC TGTGCTGACC 
GTGTTGATCA CCTCTGCGGC CATGACCCTG GCCGGTCAGG CCTGCGCGCA GGACAGCACT
GCTCAAGGCC AATCGATGCT GGGTGACAGG TTCAACGTCA ATTTCGGACT CGGCATGGCC
GTGCTGCCGC GCTACATGGG GGCTGATGAA TACCGCAGTC AGGTGGTGCC CATGCTGACG
GTCCAGCGTG GCATCTTCTT CGCCGACACC ACGCGCGGTC TGGGGCTGCA ATGGCAGTCG
GATTCCGGGT TCGGTGCCAG CGCTGCACTC AATTACGATT TCGGTCGTAC CGAGAAAAAC
AGTACGAATC GGCCTGGTTC CAACGAGCTG ATAGGGATGG GTACCGTCAA GGGCGCGACC
GTTGGCGACT TCATGGTTTC TCAGCAACTC ATGCCGTGGC TGTCCGTCAG TGCCGAGGCC
GAACTGCGGG TGGCTGGCGA ACAACGTGGC AATCGCTATC GGTTGGGCTT CGAGGGCATC
GCTTATCACA GCCAGACCGA CACGGTGACC CTCGACATTG ATGCGCACGC CGGTGACGGT
CGTTACAACC AGACCTATTT CGGCGTGAGT CCGATTCAGA GTCAGCGCAC CGGCTTCTCC
CGTTTCAACG CAGACAGCGG CATTTACGCG TACTCGGCGG CGCTCGCCTG GCAGCATACC
TTCGACGCCC ACTGGTCAAC CGTCGCAAGC GTCGGGGTGA CGCACTACAC CGACCAGACC
CGGGGCAGCC CGTTGGTCGA GACCGATGCC GAAGGCAGTG GCCTGATTGC CTTGAATTAC
GCTTTCTGA
 
Protein sequence
MSPAISRTHL RSALLKPVLT VLITSAAMTL AGQACAQDST AQGQSMLGDR FNVNFGLGMA 
VLPRYMGADE YRSQVVPMLT VQRGIFFADT TRGLGLQWQS DSGFGASAAL NYDFGRTEKN
STNRPGSNEL IGMGTVKGAT VGDFMVSQQL MPWLSVSAEA ELRVAGEQRG NRYRLGFEGI
AYHSQTDTVT LDIDAHAGDG RYNQTYFGVS PIQSQRTGFS RFNADSGIYA YSAALAWQHT
FDAHWSTVAS VGVTHYTDQT RGSPLVETDA EGSGLIALNY AF