Gene Psyr_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2931 
Symbol 
ID3368451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3520125 
End bp3520994 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID637653277 
Productnickel/cobalt efflux protein RcnA 
Protein accessionYP_236003 
Protein GI66046162 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0470601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATT TCGTCGAGCT GTTGCAGCAA GGTGGTTCGC ATGCCTGGCT GTATTTCCCC 
AGTGCCATTC TGCTGGGCGC GTTGCACGGG CTGGAGCCCG GGCATTCGAA AACCATGATG
GCGGCGTTCA TCGTGGCCAT TCGTGGCTCC GTGAAACAGG CCGTGATGCT CGGCGTCGCC
GCTACCGTCT CGCACACTGC CGTTGTCTGG CTGGTGGCCA TCGGCGGGAT GTATCTGGGG
CAGGGGCTGG ACGCTGAAAC CACGGAGCCT TATTTTCAGC TCGCGTCGTC TGCCGTGATC
ATCGCCATCG CGCTGTGGAT GCTGTGGCGC ACCTGGCGTG GCGAGCAGTT GTATAAGTTC
GAAAGTGCCC GGCTCAGTCA CGGGCATACA GGCCATGGCC ATGAGCACGA CATTGACTTC
AAAGAGCATG AGCACGGTCA CAGCCATGAC CACAGCGATC TGGGCGGCTT GAGCCTGAGC
GCCGAGGGCT ACCAGGATGC CCATGAAAAG GCCCATGCCG ACGACATCCG CAAGCGCTTC
ACCCATCGAG AGGTCAGCAA TGGCCAGATC CTGATGTTCG GCTTGACCGG GGGACTTATC
CCTTGCCCGG CGGCCATCAC CGTGCTGCTG CTGTGCCTGC AGGTGCAGCA GGTCACGCTT
GGCGCGATGA TGGTGATCTG TTTCAGCGTG GGACTTGCCA TCACGTTGGT CACCGTTGGT
GCGGCCGCCG CCATCGGTGC GCGAAGAGCC TCGAATCGTT TCCCCTGGCT CACTGCAGCC
GCTCGACGCG CACCTTACCT GTCCAGCGTC CTGATTATTT GTGTCGGGAT GTATGTAGGA
ATCAACGGTT GGATCGGCCT GCACTCGTGA
 
Protein sequence
MPNFVELLQQ GGSHAWLYFP SAILLGALHG LEPGHSKTMM AAFIVAIRGS VKQAVMLGVA 
ATVSHTAVVW LVAIGGMYLG QGLDAETTEP YFQLASSAVI IAIALWMLWR TWRGEQLYKF
ESARLSHGHT GHGHEHDIDF KEHEHGHSHD HSDLGGLSLS AEGYQDAHEK AHADDIRKRF
THREVSNGQI LMFGLTGGLI PCPAAITVLL LCLQVQQVTL GAMMVICFSV GLAITLVTVG
AAAAIGARRA SNRFPWLTAA ARRAPYLSSV LIICVGMYVG INGWIGLHS