| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2923 |
|---|
| Symbol | |
|---|
| ID | 3368443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3511915 |
|---|
| End bp | 3512841 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637653269 |
|---|
| Product | carbohydrate kinase, PfkB |
|---|
| Protein accession | YP_235995 |
|---|
| Protein GI | 66046154 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.123757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTA AATTGTTCTA CACCGGCCAA GTCGTGGTTG ACTTGGTGAT GGCCATCGAC
CGCCTGCCGC CGTCGGGCGG AGACGTGTTG GCTACCAGCG CTACGTTCGA GGCCGGAGGC
GGTTTCAATG TCATGGCCGC TGCGTGCCGC AATGGCTTGC GCACCGTTTA CCTGGGTCGC
CATGGCCAGG GCCGCTTCGG CGACATTGCT CGCCAGGCCA TGCGCGACGA AGGTGTGGAA
ATTTCTACGA TGCCCGTTTC CGGTGAGGAC ACCGGCCTGG CCGTTGCCCT GGTGGAAGCC
TCGGCCGAGC GCTCGTTCAT CTCCTATGTG GGCGCTGAAG GTGGCTTGTC TGCCGAGGAT
CTGCATGGCG TGCAGGTCAG CGCCGAAGAT TATGTATTTG TCAGCGGCTA CAGCCTGGCC
CACAAAAACA AGGTTACAGC CCTGCTCGCC TGGCTGGGCG GATTGCCCAG CGGCACTGCC
GTGGTATTCG ACCCAGGCCC ATTGGTTGAT GCGCTTTATG GCGTCGAGAT GCGCGCCGTA
CTTCCCCTGA TCAGCTTATG GTCCAGCAAC CGCGAAGAAG CCCTGCGCTT CACGCAAACC
CAGACGCCCG CCGACGCGCT CCACAGCCTG GCTTCCACTC TGCGCGAAGA TGCGCTCATA
GTGATGCGTG ACGGCCCCGC AGGCTGCTGG ATCCACCATG CTGGACAGAC GCGGCTCATA
CCCGGCTTTG CCGTCACGGC ACTCGACACC AATGGAGCCG GCGACGCTCA TGCCGGTGTG
CTGCTGGCCG AGTTGGCCAG GGGCAGCAGC GTCGACCGGG CGGCGCTGCG CGCCAATGCG
GCAGCAGCGA TTGCGGTCAC CCGCCGGGGG CCGGCGACGG CGCCTGGCCG TGAGGAGATA
GATGCGCTGG TGGGGGCCGA TGTCTAA
|
|---|
| Protein sequence | MPAKLFYTGQ VVVDLVMAID RLPPSGGDVL ATSATFEAGG GFNVMAAACR NGLRTVYLGR
HGQGRFGDIA RQAMRDEGVE ISTMPVSGED TGLAVALVEA SAERSFISYV GAEGGLSAED
LHGVQVSAED YVFVSGYSLA HKNKVTALLA WLGGLPSGTA VVFDPGPLVD ALYGVEMRAV
LPLISLWSSN REEALRFTQT QTPADALHSL ASTLREDALI VMRDGPAGCW IHHAGQTRLI
PGFAVTALDT NGAGDAHAGV LLAELARGSS VDRAALRANA AAAIAVTRRG PATAPGREEI
DALVGADV
|
|---|
| |