Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2739 |
Symbol | |
ID | 3368256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3325272 |
End bp | 3325877 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653087 |
Product | ThiJ/PfpI |
Protein accession | YP_235816 |
Protein GI | 66045975 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.446828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACTCA ATATCGGTAT CTACGTTTAT GACGACGTCG AGGTTCTCGA CTTCGCTGGC CCCTATGAAG TATTCACCAC CGCAACCCGC ATGCACGCCC GCAACAGCCG TGATGACCGG CAGTTGTTCA ACGTGTTCAC CATTGGCCGC AGCACCGCGT CAGTGCGTGC CCGCGCCGGG CTCAAGGTCG ATCCGGATTT CTCGATCAAC GACCATCCGC CCGTCGACTG CCTGATCGTT CCGGGCGGCG TCGTGACCGC TGAACTGGAA AAGCCCGACG TGATTCACTG GATCAGCGAT CAGTCGGAGC CTGGCCGCGT GGTCGCTGCC GTATGCACCG GCGCCTTCCT GCTGGCCAGG ACCGGCAAAC TGGCCGGCAA GCAGGTGACC ACCCACTGGG AAGACATCGA CGACCTCAAG GAAATGTTCC CGTCGGTGGA CGTGCTCAGC ACGCTGCGCT GGGTCGATGA AGGCTCGTTC GTGACCTCGG CAGGTATTTC CGCCGGTATC GACATGAGCC TGCACCTGGT CGAGCGTCTG CACAGCCGTG AGCTGGCCGA ACGTACCGCG CTGCAAATGG ATTTCGACTG GACCGAGAAC GACTGA
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Protein sequence | MPLNIGIYVY DDVEVLDFAG PYEVFTTATR MHARNSRDDR QLFNVFTIGR STASVRARAG LKVDPDFSIN DHPPVDCLIV PGGVVTAELE KPDVIHWISD QSEPGRVVAA VCTGAFLLAR TGKLAGKQVT THWEDIDDLK EMFPSVDVLS TLRWVDEGSF VTSAGISAGI DMSLHLVERL HSRELAERTA LQMDFDWTEN D
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