Gene Psyr_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2739 
Symbol 
ID3368256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3325272 
End bp3325877 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID637653087 
ProductThiJ/PfpI 
Protein accessionYP_235816 
Protein GI66045975 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.446828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACTCA ATATCGGTAT CTACGTTTAT GACGACGTCG AGGTTCTCGA CTTCGCTGGC 
CCCTATGAAG TATTCACCAC CGCAACCCGC ATGCACGCCC GCAACAGCCG TGATGACCGG
CAGTTGTTCA ACGTGTTCAC CATTGGCCGC AGCACCGCGT CAGTGCGTGC CCGCGCCGGG
CTCAAGGTCG ATCCGGATTT CTCGATCAAC GACCATCCGC CCGTCGACTG CCTGATCGTT
CCGGGCGGCG TCGTGACCGC TGAACTGGAA AAGCCCGACG TGATTCACTG GATCAGCGAT
CAGTCGGAGC CTGGCCGCGT GGTCGCTGCC GTATGCACCG GCGCCTTCCT GCTGGCCAGG
ACCGGCAAAC TGGCCGGCAA GCAGGTGACC ACCCACTGGG AAGACATCGA CGACCTCAAG
GAAATGTTCC CGTCGGTGGA CGTGCTCAGC ACGCTGCGCT GGGTCGATGA AGGCTCGTTC
GTGACCTCGG CAGGTATTTC CGCCGGTATC GACATGAGCC TGCACCTGGT CGAGCGTCTG
CACAGCCGTG AGCTGGCCGA ACGTACCGCG CTGCAAATGG ATTTCGACTG GACCGAGAAC
GACTGA
 
Protein sequence
MPLNIGIYVY DDVEVLDFAG PYEVFTTATR MHARNSRDDR QLFNVFTIGR STASVRARAG 
LKVDPDFSIN DHPPVDCLIV PGGVVTAELE KPDVIHWISD QSEPGRVVAA VCTGAFLLAR
TGKLAGKQVT THWEDIDDLK EMFPSVDVLS TLRWVDEGSF VTSAGISAGI DMSLHLVERL
HSRELAERTA LQMDFDWTEN D