| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2736 |
|---|
| Symbol | |
|---|
| ID | 3368253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 3321952 |
|---|
| End bp | 3324015 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637653084 |
|---|
| Product | glycosidase, putative |
|---|
| Protein accession | YP_235813 |
|---|
| Protein GI | 66045972 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02455] trehalose synthase, Pseudomonas stutzeri type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.506045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.231519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAC CGGACAAGCA GTACGTGGAA TGGCTGGTCG AGCAATCGAT GCTGAACGCC
GCAAGACAGC GCGCCAAGAC CTATTCGGGG CAGGGCAGGC TCTGGCAGCG TCCTTTCGCC
CTTGCACGTC CCAGAGATGC CTCCGCTATC GCCTCGGTCT GGTTCACCGC CTACCCGGCC
TCCATCGTCA CCCGCGAAGG CGGCTCGGTG CTCGAAGCGC TGGGTGATGA AACGCTGTGG
CATGCACTGT CGGAGATCGG CATTCAGGGC ATTCACAACG GGCCGCTGAA GCTGTCCGGC
GGACTGCAGG GGCGCGAACG CACGCCGAGT ATCGATGGCA ACTTCGACCG CATCAGTTTC
GGCATCGACC CGGACCTGGG TACCGAAGCG CAACTGTTGA GCCTGACGCG CATTGCCGCA
GCGCACAACG CGGTGATCAT CGACGACATC ATCCCGTCGC ACACCGGCAA GGGCGCAGAC
TTCCGCCTGG CCGAGATGGC GTACGAGGAT TACCCCGGCC TGTTCCACAT GGTCGAGATC
CGTGAGGAAG ACTGGCAGCT GTTGCCTGAA GTGCCAGCGG GTCGCGATGC GGTCAACCTG
ATGCCCGATG TGGTGGATCA GCTGCGCGAC AAGCACTACA TCGTCGGTCA GTTGCAGCGG
GTGATTTTCT TCGAGCCCGG GGTCAAGGAA ACCGACTGGA GCGCCACCGA CGTGGTACAG
GGCGTCGACG GCAAGGCCCG TCGCTGGGTT TACCTGCATT ACTTCAAGGA CGGCCAGCCG
TCCCTGAACT GGCTGGACCC CAGCTTCGCC GCGCAGCAGA TGATCATCGG TGACGCGCTG
CATGCCATCG ATGTCATGGG CGCCCGGGTG TTGCGCCTGG ACGCCAACGG TTTCCTTGGC
GTCGAACGTC GCGCCGAAGG CACCGCCTGG TCGGAAAGCC ATCCGCTGTC GATCACCGGC
AACCAGCTTC TGGCCGGCGC GATCCGCAAG GCCGGCGGCT TCAGCTTCCA GGAACTGAAC
CTGACCATCG ATGACATTGC CTCCATGGGG CAGGGTGGCG CGGATCTGTC CTACGACTTC
ATTACCCGGC CGGCCTATCA GCACGCGCTG CTTACCGGCA CCACCGAGTT CCTGCGCCTG
ATGCTGCGTC AGGTGCATGC CTATGGCATC GATCCGGCGT CATTGATCCA TGCCTTGCAG
AACCATGATG AGCTGACCCT GGAACTGGTG CACTTCTGGA CGCTGCACGC CCACGACACC
TTCCATTACC AGGGCCAGAC GTTCCCGGGC AACATCCTGC GTGAACACAT TCGTGAGGAA
ATGTACGAGA AGCTGTCCGG CGAACACGCG CCGTACAACC TCAAGTTCGT CACCAACGGC
GTCTCCTGCA CCACGGCGAG CATCATCACT GCAGCGCTGG GCATTCGTGA CCTGAGCACC
ATTACCGATG CCGACATTCA GCAGATCCAG CACATTCACC TGCTGCTGGT GATGTACAAC
GCCATGCAGC CGGGCGTGTT TGCCTTGTCT GGCTGGGACC TTGTCGGTGC CCTGACGCTG
CCGGCCGAGC AGGTCGACCA CCTGATGCAG GATGGCGACA CACGCTGGGT TCACCGCGGC
GCCTACGATC TGGTTGATCT CGACCCGGAA GCCGAGTTTT CTGCCGGTGA CATGCCGCGT
CCCAAGACGT TGTACGGCAG CCTGGTCACT CAGCTCCAGC GTCCAGATTC GTTTGCCTCG
CAGCTCAAGA AGATTCTCGC TGTGCGCCGC GCCTATGACA TCGCGGCAAG CCGTCAGATT
CTGATTCCTG ATGTCGAGCA TCCAGGGCTG CTGGTCATGG TCCATGAGCT GCCGGCCGGC
AAGGGCACGC AGATCACTGC GCTTAATTTC AGCGCGGAGA CGATCGTCGA AACGCTGCAG
TTGCCTGGCA TTGCGCCGGG TCCGGTGGTT GACATCATCA ACGAGCGTGT TGAAGGCGAT
CTGACCGAGC AGGGCGAGTT CACCATCACC CTCGATGCCT ACGAAGGGCT GGCTCTGCGT
GTGGTCAGCG CCTTGCCACT CTGA
|
|---|
| Protein sequence | MTIPDKQYVE WLVEQSMLNA ARQRAKTYSG QGRLWQRPFA LARPRDASAI ASVWFTAYPA
SIVTREGGSV LEALGDETLW HALSEIGIQG IHNGPLKLSG GLQGRERTPS IDGNFDRISF
GIDPDLGTEA QLLSLTRIAA AHNAVIIDDI IPSHTGKGAD FRLAEMAYED YPGLFHMVEI
REEDWQLLPE VPAGRDAVNL MPDVVDQLRD KHYIVGQLQR VIFFEPGVKE TDWSATDVVQ
GVDGKARRWV YLHYFKDGQP SLNWLDPSFA AQQMIIGDAL HAIDVMGARV LRLDANGFLG
VERRAEGTAW SESHPLSITG NQLLAGAIRK AGGFSFQELN LTIDDIASMG QGGADLSYDF
ITRPAYQHAL LTGTTEFLRL MLRQVHAYGI DPASLIHALQ NHDELTLELV HFWTLHAHDT
FHYQGQTFPG NILREHIREE MYEKLSGEHA PYNLKFVTNG VSCTTASIIT AALGIRDLST
ITDADIQQIQ HIHLLLVMYN AMQPGVFALS GWDLVGALTL PAEQVDHLMQ DGDTRWVHRG
AYDLVDLDPE AEFSAGDMPR PKTLYGSLVT QLQRPDSFAS QLKKILAVRR AYDIAASRQI
LIPDVEHPGL LVMVHELPAG KGTQITALNF SAETIVETLQ LPGIAPGPVV DIINERVEGD
LTEQGEFTIT LDAYEGLALR VVSALPL
|
|---|
| |