Gene Psyr_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2726 
Symbol 
ID3368243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3307967 
End bp3309868 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content63% 
IMG OID637653074 
Productferuloyl-CoA synthase 
Protein accessionYP_235803 
Protein GI66045962 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0855511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.884333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGAA CGCACGTGAG TTCCGATATC AGATCGTCAA CGCTGCAGAG TGAAGATAAT 
CCACCGCGCT ATCGTCAGGT CTCCATCGGC CACCCGCCCA TCGAGGTGCG GGAAGAGCAG
GGCGTTCTGC ACATGCGGGC CCTGGAACCC CTGGCCCGGT TACCCGACCG GCTGCTCGAC
CGACTGGTGC ATTGGGCGCA GTTGCGTCCG CAACAGACCT TCATTGCCGC TCGCGACAGC
CGTGGCGGCT GGCGCAAGGT CAGTTATGCC GAGATGCTGA CTGACGTGCG CGCTATCGCA
CAGAGCCTGC TGGCGTACGG ACTTTCCGCC GATCGGCCGC TGGCGTTGCT GTCAGGTAAT
GACATCGAGC ACTTGCAGCT CGCTCTGGGT GCCATGTACG CCGGCATTCC CTACTGCCCG
GTCTCACCGG CATATTCGGT CATGTCTCAG GATTTCGCCA AGTTACGACA CGTCTGCGAC
GTGCTGCGGC CAGGACTGGT ATTTGTCAGT GATGCCGCGC CGTTTCAGCG AGCCATCGAT
GCGGTCATTG CGGCCGACAC GCCGGTCATC ACTGTACGCG GACAGCTCAA TGGCAGGCCT
GCGCTGAGCT TCGCCAGCCT GCTCGAAGAA CCGGGTGGCA GCGAGGCGGA TGCCGCTTTC
CTGGCCAGCG GCCCCAACAC CATCGCCAAG TTTCTGTTCA CCTCGGGCTC GACCAAACTG
CCCAAGGCGG TGGTGACCAC CCAGCGCATG CTGTGTGCCA ATCAACAGAT GCTCTTGCAG
ACATTTCCGG TGTTCGGCGA AGAACCGCCC GTGCTGGTCG ACTGGCTGCC CTGGAACCAC
ACCTTCGGCG GCAGTCATAA TCTCGGCATC GTGCTGTACA ACGGTGGCAC GTTCTATCTG
GACAACGGCA AGCCAACCGT TCAAGGCTTC GCCGAGACCC TGCGCAACCT CAAGGAAATT
TCGCCTACCG CTTACCTGAC TGTGCCCAAG GGCTGGGAGG AGCTGGTCAA CGCACTGGAG
CAGGACGCCG AGCTGCGCGA GCGATTCTTC TCGCGTATCA AGCTGTTCTT CTTCGCCGCT
GCCGGCCTGT CGCAAAGCAT CTGGGATCGC CTTGACCGGG TGGCCGAGCA GCATTGCGGC
GAGCGGATTC GCATGATGGC CGGACTGGGC ATGACCGAGG CTGCGCCGTC CTGCACCTTC
ACCACCGGGC CCTTGTCGAT GGCCGGTTAC ATCGGCCTGC CCGCACCGGG ATGCGAAGTG
TGTCTGGTGC CTGTGGATGG CAAGCTCGAA GGACGTTTTC GTGGTCCGCA CATCATGCCG
GGCTATTGGC GCTCGCCGCA GCAGACTGCC GAAGTGTTCG ACGAGAACGG CTTCTATTGC
TCCGGCGATG CGATCAAGCT TGCCGATCCT GCGGCACCCG AGCTGGGCCT GATGTTCGAC
GGGCGTCTGG CCGAGGATTT CAAGCTGTCG TCGGGCGTGT TCGTCAGTGT CGGGCCGATG
CGCAATCGGG CGGTGCTGGA AGGCTCGCCG TACGTGCAGG ATGTGGTCAT CACCGCGCCT
GACCGCGAAT GCCTCGGGGC GCTGGTGTTT CCCAGAGTGC ACGAGTGTCG GCAACTGGCC
GGGCTGGATG CACAGGCCAC GGATGCACAG GTACTGGCCA GTGCGCCGGT ACGTGAGTGG
TTCGCCGGCT GGCTGGCGCG CCTGAATCAG GGCGCGAACG GCAACGCCAG CAGGCTGGAG
TGGATCGTGC TGCTTGATCA GCCCGCGTCC ATTGATCGCG GCGAAATTAC CGACAAGGGG
TCGATCAACC AGCGCGCTGT TCTGCAGTGG CGCGCAGACA AGGTCGAAGC GCTGTACCGT
GATCAGGATC CGGACAAGCT CCGTGCCGAG CCCAAGGCAT GA
 
Protein sequence
MERTHVSSDI RSSTLQSEDN PPRYRQVSIG HPPIEVREEQ GVLHMRALEP LARLPDRLLD 
RLVHWAQLRP QQTFIAARDS RGGWRKVSYA EMLTDVRAIA QSLLAYGLSA DRPLALLSGN
DIEHLQLALG AMYAGIPYCP VSPAYSVMSQ DFAKLRHVCD VLRPGLVFVS DAAPFQRAID
AVIAADTPVI TVRGQLNGRP ALSFASLLEE PGGSEADAAF LASGPNTIAK FLFTSGSTKL
PKAVVTTQRM LCANQQMLLQ TFPVFGEEPP VLVDWLPWNH TFGGSHNLGI VLYNGGTFYL
DNGKPTVQGF AETLRNLKEI SPTAYLTVPK GWEELVNALE QDAELRERFF SRIKLFFFAA
AGLSQSIWDR LDRVAEQHCG ERIRMMAGLG MTEAAPSCTF TTGPLSMAGY IGLPAPGCEV
CLVPVDGKLE GRFRGPHIMP GYWRSPQQTA EVFDENGFYC SGDAIKLADP AAPELGLMFD
GRLAEDFKLS SGVFVSVGPM RNRAVLEGSP YVQDVVITAP DRECLGALVF PRVHECRQLA
GLDAQATDAQ VLASAPVREW FAGWLARLNQ GANGNASRLE WIVLLDQPAS IDRGEITDKG
SINQRAVLQW RADKVEALYR DQDPDKLRAE PKA