Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2707 |
Symbol | |
ID | 3368224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3288077 |
End bp | 3288964 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653055 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_235784 |
Protein GI | 66045943 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0135797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0584976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATATG AAATCACCCA CGCCGACCTT TCATTGGTGC TCGCCCTGGT TCGCGGCCGC ACGCTGGCAC GCGCCGCCGA TCTGTTGCAG GTTGATGTAT CGACCGTATT CCGCTCGATC CGTCGCCTGG AAGCAGCCCT CGGTGCAGCG CTGTTTGAAA AGAACCGGCG CGGGTACATA CCGACCGATA CCGCGCAGGC CATGGCCGAG CAGGCCGAGC GCGCCGAACA GGCGCTTGCT GCTGCGCGCA TCGCCCTGCA ACAGGGCGAA CAGGTCGTCA GCGGCACGGT ACGCCTGACC TGTACCGATG CAGTACTGCA TAGCCTGCTA TTACCAGCGC TGGCGGACTT CATGCCGCAG TACCCTGCCC TTACGCTGGA GCTGGCCACC TCCAATGCCT TTGCCAACCT CAGCCGTCGC GATGCCGACA TCGCCCTGCG CCTGACCAAT ACGCCACCCG AGCACCTGAT CGGACGCTGC CTGGGCAGTG CCGACTACTT TGTCTGTGGC CGAGCCGAAT ACCGCGAGGC CTTGACGCAG AACCCTGCCT CGATCCCGTG GATCAGCCCG GACGACTCGA TGCCCGACCA CACCTCGGTA ATCTGGCGTA AACAGGCCTT TCCGGGGGTA TTACCGAGCT ACCGCTGCAG CAACATGTCG GCAGTCTCGC AGTTGGTCGC TGCCGGCCTG GGCGTCGCGG CGTTGACCGG ATTCACGGTC GAGGGCCTTG GAGCGGTCGA ACGCCTGAGT GGCCCGCTGG AAGGATGCCG CACCGACCTG TGGCTGCTGA CCCGCCCCGA CTGTCGCGCA CTGCGTTCTG TGCAGACCCT GCTGGAAGCA CTCGCGCCAC GACTGCGAGC CGCATTGCAG GTATCCAGCC CCGGCTGA
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Protein sequence | MQYEITHADL SLVLALVRGR TLARAADLLQ VDVSTVFRSI RRLEAALGAA LFEKNRRGYI PTDTAQAMAE QAERAEQALA AARIALQQGE QVVSGTVRLT CTDAVLHSLL LPALADFMPQ YPALTLELAT SNAFANLSRR DADIALRLTN TPPEHLIGRC LGSADYFVCG RAEYREALTQ NPASIPWISP DDSMPDHTSV IWRKQAFPGV LPSYRCSNMS AVSQLVAAGL GVAALTGFTV EGLGAVERLS GPLEGCRTDL WLLTRPDCRA LRSVQTLLEA LAPRLRAALQ VSSPG
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