Gene Psyr_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2707 
Symbol 
ID3368224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3288077 
End bp3288964 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID637653055 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_235784 
Protein GI66045943 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0135797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0584976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATG AAATCACCCA CGCCGACCTT TCATTGGTGC TCGCCCTGGT TCGCGGCCGC 
ACGCTGGCAC GCGCCGCCGA TCTGTTGCAG GTTGATGTAT CGACCGTATT CCGCTCGATC
CGTCGCCTGG AAGCAGCCCT CGGTGCAGCG CTGTTTGAAA AGAACCGGCG CGGGTACATA
CCGACCGATA CCGCGCAGGC CATGGCCGAG CAGGCCGAGC GCGCCGAACA GGCGCTTGCT
GCTGCGCGCA TCGCCCTGCA ACAGGGCGAA CAGGTCGTCA GCGGCACGGT ACGCCTGACC
TGTACCGATG CAGTACTGCA TAGCCTGCTA TTACCAGCGC TGGCGGACTT CATGCCGCAG
TACCCTGCCC TTACGCTGGA GCTGGCCACC TCCAATGCCT TTGCCAACCT CAGCCGTCGC
GATGCCGACA TCGCCCTGCG CCTGACCAAT ACGCCACCCG AGCACCTGAT CGGACGCTGC
CTGGGCAGTG CCGACTACTT TGTCTGTGGC CGAGCCGAAT ACCGCGAGGC CTTGACGCAG
AACCCTGCCT CGATCCCGTG GATCAGCCCG GACGACTCGA TGCCCGACCA CACCTCGGTA
ATCTGGCGTA AACAGGCCTT TCCGGGGGTA TTACCGAGCT ACCGCTGCAG CAACATGTCG
GCAGTCTCGC AGTTGGTCGC TGCCGGCCTG GGCGTCGCGG CGTTGACCGG ATTCACGGTC
GAGGGCCTTG GAGCGGTCGA ACGCCTGAGT GGCCCGCTGG AAGGATGCCG CACCGACCTG
TGGCTGCTGA CCCGCCCCGA CTGTCGCGCA CTGCGTTCTG TGCAGACCCT GCTGGAAGCA
CTCGCGCCAC GACTGCGAGC CGCATTGCAG GTATCCAGCC CCGGCTGA
 
Protein sequence
MQYEITHADL SLVLALVRGR TLARAADLLQ VDVSTVFRSI RRLEAALGAA LFEKNRRGYI 
PTDTAQAMAE QAERAEQALA AARIALQQGE QVVSGTVRLT CTDAVLHSLL LPALADFMPQ
YPALTLELAT SNAFANLSRR DADIALRLTN TPPEHLIGRC LGSADYFVCG RAEYREALTQ
NPASIPWISP DDSMPDHTSV IWRKQAFPGV LPSYRCSNMS AVSQLVAAGL GVAALTGFTV
EGLGAVERLS GPLEGCRTDL WLLTRPDCRA LRSVQTLLEA LAPRLRAALQ VSSPG