Gene Psyr_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2704 
Symbol 
ID3368221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3285422 
End bp3286450 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content59% 
IMG OID637653052 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_235781 
Protein GI66045940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.647112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGG TTACCGGTGG TGCGGGATAC ATTGGCGCTC ACATCGCGCT CGAGTTGCTT 
GAAGATGGCC GCGATGTCGT CGTGCTTGAT AACTTGTGCA ACAGTTCGCG AGAGCCGTTA
AGACGGATAG AGGAACTCTG CGGGCGACAG GTTGCGTTCA TCCACGGCGA CGTGCGCAGC
AAAGCGACGT TGCACCGGCT GTTCGCTCAG TACCCTGTCA AGGCAGTGGT GCATTGCGCC
GGACTCAAGG CGGTGGGCGA AAGCGTTCGA GAGCCGCTGC GCTATTTCGA GACCAACGTG
AGCGGCAGCG TCAACTTGTG TCAGGCAATG GCAGAAGCAG GCGTGTTCGA CCTGTTATTC
AGCTCATCCG CGACGGTTTA CGGCGGGTGT GAGCAAATGC CGCTGGATGA GAACTGCCCA
CTGGGTTTAC CGACCAATCC TTACGGGCAC TCCAAACTGA TGGCCGAGCA TGTGATGCAA
AGCGTCGCCC GCTCGGATCC ACGCTGGTCC ATCGGTCTGC TGCGCTACTT CAACCCCATT
GGTGCGCATC CGTCCGGCCT GCTGGGCGAG TCACCCTGCA ACACGCCGAA CAACCTGTTG
CCCTTCCTGC TGCAGGTTGC CAATCGACTA CGCCCTGCCC TGCACATATT CGGCAGTGAC
TACCCCACGC TGGACGGAAC AGGTGTGCGT GATTACCTTC ATGTGATGGA TCTGGCCGAG
GGACACCTGA AGGCGCTGGA CAAAATTCAT GACGAACGTG GCGTATCCGT CTGGAATCTG
GGCACAGGAC AGGGTTATTC GGTGCTTGAG GTGGTGCACG CCTTCGAACG TATCTCCGGC
AAAGCTGTGC CGTTGATCTT TGAACCACGC CGGCCCGGAG ACATTGCAGC ATGCTGGTCC
GATCCGGGAA AAGCAGCGCG CGAGCTGGAT TGGCGGGCCA GGTTCAACCT TGATTCGATG
CTCACCGACG CCTGGCGCTG GCAGTGCATG AACCCTCAGG GTTACAGGCC GACAGCGCTG
GTCAGTTGA
 
Protein sequence
MILVTGGAGY IGAHIALELL EDGRDVVVLD NLCNSSREPL RRIEELCGRQ VAFIHGDVRS 
KATLHRLFAQ YPVKAVVHCA GLKAVGESVR EPLRYFETNV SGSVNLCQAM AEAGVFDLLF
SSSATVYGGC EQMPLDENCP LGLPTNPYGH SKLMAEHVMQ SVARSDPRWS IGLLRYFNPI
GAHPSGLLGE SPCNTPNNLL PFLLQVANRL RPALHIFGSD YPTLDGTGVR DYLHVMDLAE
GHLKALDKIH DERGVSVWNL GTGQGYSVLE VVHAFERISG KAVPLIFEPR RPGDIAACWS
DPGKAARELD WRARFNLDSM LTDAWRWQCM NPQGYRPTAL VS