| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2637 |
|---|
| Symbol | |
|---|
| ID | 3368154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 3203776 |
|---|
| End bp | 3205101 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637652985 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_235714 |
|---|
| Protein GI | 66045873 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.754665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAC CTTTAACTCC CGTGCATACC TCTGCAGATC TGCCGGCGCA GGCCGATGTG
GTTGTGATCG GCGGCGGTAT CATCGGCGCG TTTACCGCCT ATTACCTTGC CAGGCGCGGC
ATGAAGGTCG CGCTGGTTGA AAAGGGCCGC ATAGGCGCCG AGCAGTCAAG CCGTAACTGG
GGCTGGTGCC GCCAACAGAA TCGCGATGCG CGTGAACTGC CGATGGCCAC CAAAAGCCTG
GAACTGTGGG AGCAATTCGC CGAGCAATCC GGTGAACAGA CCGGCTTTAC ACGTTGCGGC
TTGCTCTACC TGAGTAACAA CGACCAGGAG CTGGAAGGGT GGGCGCGCTG GGGCGAGTTT
GCGCGCACTG TCAACGTGCA GACCCAGATG CTCACCGCCG AGCAGGCCGC CGAACGGGGC
AGGGCGACGG GCAAGCCTTG GAAAGGCGGG GTGTTTGCGC CCACCGATGG CATTGCCGAC
CCTTCCCGCG CAGCCCCCGC AGTCGCGCGC GCCATCATGG CACTGGGCAG TAGCGTGCAT
CAGGATTGCG CCGTGCGAGG CGTCGAGACC GAAGGTGGTC GCTTGTCGGC AGTGGTCACC
GAAAAAGGCA CCATCCGCAC CCGGCTCGCG GTGCTTGCCG CAGGCGCCTG GGCATCTTCG
TTCTGCCGCC AGTATGGTAT TCGCTTCCCG CAAGCGACGA TTCGTCAGAC CGTACTTTCG
GTCACCGCCC CGAGCCAGGA AATTCCCAGT GCGCTGCATA CCACCGGCGC GTCCATGACC
CGCCGCTTTG ATGGCAGTTA CACGCTGGCG ATCAGTGGCC GGGGGCGAGT CGATATCACG
CCGCAGTTGC TGAGGTTCTC TACACAATTC CTGCCAATGT TTCAGCGCCG CTGGCGCAAC
CTTGCGCCTG GGGGGCTGGA AGGCTGGCAA GCAGGCCACG AAAGCTTGAA GCGCTGGCGC
CTGGACCAGC CCACGCCGAT GGAGAGAATG CGCATTCTCG ACCCAAGCGC TGACGCCTCC
GCGGTTGCGC TGACTTACAA ACGCGCGGTG GAATTGGTGC CGGCACTGCA GGGTACGTCG
ATCAAGGCGT CGTGGGCCGG TTACGTGGAC AGTACGCCGG ACGGCGTTCC CGGTATTGGC
GAAATGGCCA GCCTGCCGGG GTTGGTGATC GCGGCCGGGT TCAGCGGGCA TGGCTTTGGT
ATTGGCCCGG GCGCGGGTCA TCTTATTGCC GATATTGTCA GCGGTGTGAG CCCCATTGTT
GATCCGCGTC CTTATCATCC GGACCGCTTT CAAACGTCCG CCTGGGGCAA GGTGGCGGAC
TTTTGA
|
|---|
| Protein sequence | MPAPLTPVHT SADLPAQADV VVIGGGIIGA FTAYYLARRG MKVALVEKGR IGAEQSSRNW
GWCRQQNRDA RELPMATKSL ELWEQFAEQS GEQTGFTRCG LLYLSNNDQE LEGWARWGEF
ARTVNVQTQM LTAEQAAERG RATGKPWKGG VFAPTDGIAD PSRAAPAVAR AIMALGSSVH
QDCAVRGVET EGGRLSAVVT EKGTIRTRLA VLAAGAWASS FCRQYGIRFP QATIRQTVLS
VTAPSQEIPS ALHTTGASMT RRFDGSYTLA ISGRGRVDIT PQLLRFSTQF LPMFQRRWRN
LAPGGLEGWQ AGHESLKRWR LDQPTPMERM RILDPSADAS AVALTYKRAV ELVPALQGTS
IKASWAGYVD STPDGVPGIG EMASLPGLVI AAGFSGHGFG IGPGAGHLIA DIVSGVSPIV
DPRPYHPDRF QTSAWGKVAD F
|
|---|
| |