| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2613 |
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| Symbol | |
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| ID | 3368130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3097019 |
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| End bp | 3098719 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652961 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_235690 |
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| Protein GI | 66045849 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.104435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.36301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA AGCAAGAGAA GAAGGCCAGA CCAGGCTCGA TCATGCGTCT GTTATGGAGC
AGCCATCCCT GGCTGACGTT CTTTACGCTG CTGACAGGGC TCATCAGCGG CGTTGCGTCC
ATTGCCGTGG TCAATGTGAT CAACCAGGCG ATTCACGAGG AGACCTTTCA GCGTCAGTCG
CTGTTCTGGT TTGTCGGCCT GAGCGTGGTG GCGCTCCTGT TCCGCAACGG TGCGTCGCTG
TTTCCGGCTT ACGCCAGCAT GCGCATCATG ACCCGTCTGC GCATTGCCCT GTGCCGCAAG
ATCCTCGGCA CGCCGCTTGA GGAAGTCGAC CGCCGCGGTG CGCCGAATGT GCTGACCCTG
CTGACCAGCG ATATTCCGCA ACTCAACGCC ACGCTGTTGA TCATGCCGAC GATCCTGGTG
GAGTCGGCGG TGTTCCTGTT CGGTATTGCC TACCTGGCCT ACCTGTCCTG GGTGGTGTTT
GCGATAACCA TCTCGCTGAT GATCCTGGGC GTTGCAATGT ACCTGCTGTT TTTCATGGGT
GGCATGAAGT TCACCCACAA GGTGCGCGAC GAATTCACGG CCTTCAACGA ATACACACAC
GCGCTTGTGT TCGGCCTCAA GGAACTGAAA CTCAACGGTA TTCGCCGCCG CTGGTTCAGC
CGCTCGGCGA TCCAGGAGTC TTCGGTTCGG GTCGCGAAGT ACAACTACAT CGAACGGCTC
TGGTTTACTG CCGCCGAAAA CGTTGGCCAG TTGACCCTGT CGTTGCTGGT CGGCTGCCTG
CTGTTCGCTG CGCCGATGTT CGCTGTTATC GACGCCAAGA CCATGAGCGC CAGTGTGCTG
GCGGTGCTGT ACATCATGGG CCCGCTGGTG ATGCTGGTCA GCGCCATGCC GATGCTGGCC
CAGGGACGTA TTGCCTGCAC GCGACTGGCG GATTTCGGAT TCTCCATCAA CGAACCGCAT
CCGGAGCCGG AAACCAGCGA TGCAGACAAT GTGCTGCTTC TCGATCACAA GAAGTCCTGG
GGCAGTATCC AGCTCAAGAA CGTACACATG AACTACAAGG ACCCGCAGAT CAGTTCCGGT
TTTGCCCTGG GACCTATCGA CCTGACGATC CACTCTGGTG AGCTGGTCTA CATCGTCGGC
GGCAACGGTT GTGGCAAAAG CACCCTGGCC AAAGTGTTCT GCGGCCTGTA CATCCCGCAA
GAGGGTCAGC TACTGCTCGA CGGTGCGGCG GTCACGGACG ACTCGCGCGG CGACTATCGC
GACCTGTTCT CGGCGGTGTT CTCTGACTTC CATCTGTTCA ACCGATTGAT AGGTCCTGAC
GAGAAAGAAC ATCCCAGCAC CGATCAGGCG CAGACATACC TCTCGACTCT GGGCCTGGAA
GACAAGGTCA AGATCGAGGG ACTTGGTTAC TCGACCACCA CGGCATTGTC ATACGGCCAG
CAGAAACGCC TGGCACTGGT GTGCGCCTAC CTGGAGGACC GTCCGATTTA CCTGCTGGAC
GAGTGGGCCG CCGACCAGGA CCCGCCGTTC AAGCGCTTCT TTTACGAGGA ACTGCTGCCG
GACCTCAAGC GTCGCGGCAA GACGATCCTG ATCATTACTC ACGACGATCA GTACTTCCAG
CTGGCCGACC GCATCATCAA GTTGGCGGAC GGTTGCATCG TCTCCGACGT GAAGTGCGCG
GTTGAGGGCA AACGCGCCTG A
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| Protein sequence | MKTKQEKKAR PGSIMRLLWS SHPWLTFFTL LTGLISGVAS IAVVNVINQA IHEETFQRQS
LFWFVGLSVV ALLFRNGASL FPAYASMRIM TRLRIALCRK ILGTPLEEVD RRGAPNVLTL
LTSDIPQLNA TLLIMPTILV ESAVFLFGIA YLAYLSWVVF AITISLMILG VAMYLLFFMG
GMKFTHKVRD EFTAFNEYTH ALVFGLKELK LNGIRRRWFS RSAIQESSVR VAKYNYIERL
WFTAAENVGQ LTLSLLVGCL LFAAPMFAVI DAKTMSASVL AVLYIMGPLV MLVSAMPMLA
QGRIACTRLA DFGFSINEPH PEPETSDADN VLLLDHKKSW GSIQLKNVHM NYKDPQISSG
FALGPIDLTI HSGELVYIVG GNGCGKSTLA KVFCGLYIPQ EGQLLLDGAA VTDDSRGDYR
DLFSAVFSDF HLFNRLIGPD EKEHPSTDQA QTYLSTLGLE DKVKIEGLGY STTTALSYGQ
QKRLALVCAY LEDRPIYLLD EWAADQDPPF KRFFYEELLP DLKRRGKTIL IITHDDQYFQ
LADRIIKLAD GCIVSDVKCA VEGKRA
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