| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2578 |
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| Symbol | |
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| ID | 3368095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3019095 |
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| End bp | 3019775 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637652926 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_235655 |
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| Protein GI | 66045814 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.242735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGACT ACATGCCTAA CACACTACTT CCGCAGATCG GCAGGGCCAT AGCCAGCATC
GGTAGCGGGA ATTTTTCCAG CATGTTCCAC AAGTTGATCG ATACTCAGCT TGCGGTAGAT
GCCACGCACC TCTCCTCACT GCCACAGCCC TGGCAAACGC CACCCGCCTC TGCACCGACG
GTCTTTAACG AGACGGTGAC GTCATCACGG GGCACGCTGT TGCTCAGTGA CTCGATTCAT
CTTTACCCTG ATCAGGCCTC GGAAAGCTTT AGTTGTAAAA TAACTGTATT TCGGGCGCTT
CCCGCGCATG AATTTTCAGA AAAGGAACGC CGACAGCTGG GCGACATTTC CCCTCTGCTG
TTTTCGATAC TTGAAAAACA TGTCAATGCC CTGCAATCGG CAATGCCCGG CATCGAGCAT
AAAAAGCCGG AAAGCATTGA AAAGCGCTTT CAGGAACGAC TGCGTGAAAC AGGGTTGACG
TTGTCCGAAC GCGAAACCCA AGTGTGCCTG GGGCTGCTCG CCGGCCATAC CGCGCTTGAG
CAGGCCGAGC GACTCGCACT CAAGGTCAAT ACCGTGGGCA GTTACCAGCG CCGCGCGGCG
ATCAAGCTGG GCATCAGCGG TCGCAATTCA CTGATGCGCT GGATGTATGG CTCATCAGCG
GGCGTTTTTT CAACCTGCTG A
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| Protein sequence | MDDYMPNTLL PQIGRAIASI GSGNFSSMFH KLIDTQLAVD ATHLSSLPQP WQTPPASAPT
VFNETVTSSR GTLLLSDSIH LYPDQASESF SCKITVFRAL PAHEFSEKER RQLGDISPLL
FSILEKHVNA LQSAMPGIEH KKPESIEKRF QERLRETGLT LSERETQVCL GLLAGHTALE
QAERLALKVN TVGSYQRRAA IKLGISGRNS LMRWMYGSSA GVFSTC
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