| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2554 |
|---|
| Symbol | |
|---|
| ID | 3368071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2967617 |
|---|
| End bp | 2968633 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637652902 |
|---|
| Product | Fatty acid desaturase |
|---|
| Protein accession | YP_235631 |
|---|
| Protein GI | 66045790 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.688686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA CAATCGAACT CGACACGATG GACAGTGGCG CTTACGACCG ACGCTCCGAG
CGTGCCACGT TGGCACGCGA CAACCTGTCA CTGACCTCGG ATCTCAAGCA ACTCAGCAGC
TGGCGGCAGG CATTGCAGAT AGGCGTGCAG TGGGCAGTGA TCGTCGCTGC AGTCACGCTG
GCCGAAGTCA GCGACTCGAC GCTGGTGTGT CTGATCGCGG TAATCATCAT TGCGACGCGA
CAGCACGCGT TGCTGGTACT CATGCACGAT GCGGCGCATT TGCTGATCAG CCGTGACAAG
CGGCGCAACG ATCTGATCTC CAACGTATTC CTGACGTTTC CCCTGACGTT GAGCACGTCA
CGCTACCGGG CTCACCACAT TGCCCACCAC AAGCACCTCA ACACGCCCGA CGATCCGGAC
TACGCCGATG CCTTCGCACC CGCCAGTTCC GGACTGTTCT GGCAGGCTCT GCTGCGCGAC
ATCAGTGGGC TGTCGACCCT GCAATCGCTA CGCACGATGG ACAGCTTCAG CGTGATCGGA
CTGTTCACTC ACCCCGTGCC GTCGACCCGC ATCGAGCGCT ATCAGGCAAT GGCCTTTTAT
GCCTGTGCCG CGCTGCTCAT CACGGCTTTG CAGGCCTGGC CGGCTGTGCT GCTGTACTGG
CTGGCGCCAC TGGTGTTCTT TCTGCCGCCG ATTCTACGCA TTCGCAGCCT GTCGGAGCAC
GCAGGGCTTT CGACCCAGAG TGTGAAGCGC GATGCACGCA GTGTCAGTCC GGGCTGGCTG
GAACGAGGGC TGTTTGCGCC GTGCAATATC AATCGGCACT GGGAGCATCA CCTTTTTCAA
CAGATACCCA GCTATCACCT GGGCACCTTG TCCCGGCGTC TTGCCCAGAG CCTGCCTGGT
TCAGCTGCGG CCTGCAGCAC CCAGGGTTAC CTCTTGGGGG AACGCAGCAT GCGCGCCGAA
TTGTATGGTG CCAACGGCCG GGCGCGTGCC GTGGCCTCTC TGGATCAGGA GGCTTGA
|
|---|
| Protein sequence | MADTIELDTM DSGAYDRRSE RATLARDNLS LTSDLKQLSS WRQALQIGVQ WAVIVAAVTL
AEVSDSTLVC LIAVIIIATR QHALLVLMHD AAHLLISRDK RRNDLISNVF LTFPLTLSTS
RYRAHHIAHH KHLNTPDDPD YADAFAPASS GLFWQALLRD ISGLSTLQSL RTMDSFSVIG
LFTHPVPSTR IERYQAMAFY ACAALLITAL QAWPAVLLYW LAPLVFFLPP ILRIRSLSEH
AGLSTQSVKR DARSVSPGWL ERGLFAPCNI NRHWEHHLFQ QIPSYHLGTL SRRLAQSLPG
SAAACSTQGY LLGERSMRAE LYGANGRARA VASLDQEA
|
|---|
| |