Gene Psyr_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2553 
Symbol 
ID3368070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2966473 
End bp2967582 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID637652901 
Productdehydrogenase domain-containing protein 
Protein accessionYP_235630 
Protein GI66045789 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.118589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGA CACTGATCAT CACCGGGGCC AGTGGTGCTC TGGGCTCCTG GTTTGTGCGC 
GACTGGCTCA GTCAGCATCC TGCCTCGCAT GTGATTGCCT TGTGCCGTTC CGCGCAGGCG
GCCAGTCGCT GCCTGCAGGA TTTGCCTGCG CACAGCCGCT CGCGGCTCGA ATGCCGGACC
GCCGATCTGA CAGACGCCGA CTCCCTGAAT GCGCTGGCCG CCACGCTGCC CGCCATCGAG
TGCGCCACGG CAGTCCATCT GGCTGCCGAT GTGGCCTGGG ACAAGAGCTT CGAAGAGATG
CACGAGTTGA ATGTCGAAGG TGCGCAACTG TTCTGCGGCT TTGTCCAGAA ACTGGTGCGC
AAGCCGCATT TCATTTACGT GTCCACAGCG TTCACCCGTT GTGAAGGCTG GACCTATCGC
AATGGCTATG AGGAAAGCAA GGCAGCGGCA GAGCGTGGTT TGCGTGAGAC TTTCGGCACG
CAGATGCCGA TTTCCGTGTT CAGTTGCAGC CTGGTCATCG GCGCGACCAG CGATGGCGCA
ATCAGTCGTT TTCACGGCCT GTACCCGCTG ATTCGCTTCA TCAATGCCTT TGCGCCGCCG
TTTCTGGTCG GCAATCGCCA GGGGCTGTTC GATCTGGTGC CTATCGATTG GGTGGTGGAC
GAATTGATCC ACCTGGTCAG TCATTGCGTG GCCGGCGGCG AAGCGCGCGA GGTCGTCGCC
TCGGCGGGGG ATGCACGCCT GCCTTATGAG CAGGTGATCC GCATCATCGA GTCGCGCGTC
GATCATGCGC GGCAGCAAGC CGGCATTGCG CCCTTGACCC CGGCACCGAT CCTGCGCAGC
CGGCAATGGG CATTCCTCAA GCGCTCGCTG GTCGCATGGC GGCCCGAAGG TATTTCGACC
CGGGATTTCC GCTATTTCGA GCGCCTGTTG CAAATCTATG GCGTGTACGC CGAAAGCGAT
CTGGTCAGGC CACCGTTGAA CGTCCGGAAC CCGGCACCCG GCGCGGAAGT GTTTTTACCC
AAAGCGGTGG ATTACTGGCT GGCTCATGCG CCCGAGGCAC GGATCAGCCT GGACAAGCTT
GTCGCGAAAT CGGCGGCAAT GCACGGCTAG
 
Protein sequence
MRSTLIITGA SGALGSWFVR DWLSQHPASH VIALCRSAQA ASRCLQDLPA HSRSRLECRT 
ADLTDADSLN ALAATLPAIE CATAVHLAAD VAWDKSFEEM HELNVEGAQL FCGFVQKLVR
KPHFIYVSTA FTRCEGWTYR NGYEESKAAA ERGLRETFGT QMPISVFSCS LVIGATSDGA
ISRFHGLYPL IRFINAFAPP FLVGNRQGLF DLVPIDWVVD ELIHLVSHCV AGGEAREVVA
SAGDARLPYE QVIRIIESRV DHARQQAGIA PLTPAPILRS RQWAFLKRSL VAWRPEGIST
RDFRYFERLL QIYGVYAESD LVRPPLNVRN PAPGAEVFLP KAVDYWLAHA PEARISLDKL
VAKSAAMHG