| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2537 |
|---|
| Symbol | |
|---|
| ID | 3368054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2951996 |
|---|
| End bp | 2953456 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637652885 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235614 |
|---|
| Protein GI | 66045773 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0439912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATG TGAATGCACC CGCTGGCCTG GCTGCTCTGG AAGCTCGCTT GCAGCAGGAT
CTGGCCTGGC TGGATCTGCC CGCCAGGCCA TGGGTCAAGC CCAGGATCAG CGCAGGGCAG
GCCGTACTCG ACGTGGCGAT CATCGGCGGA GGCATGGCCG GCCTTGCCCT GTCCGCAGAG
CTGCGCAATC TCGGTGTCGC GGCGGTGATT TTCGATCAGT CACCAGCAGG TTTCGAAGGC
CCCTGGGCCA CCACGGCGCG AATGGAAACC CTGCGTTCGC CAAAGCAGCT GACCGGACCG
GCACTGGGCT TGCCAGCGCT GACGTTTCGC GCCTGGTACG AAGCGCAATT CGGCGCCGAT
GGCTGGGCGT TGCTGGACAA GATTCCACGT TTGCAATGGG CCGAGTATCT GCGCTGGTAT
CGCAAGGTGC TGGCCCTGGA CGTACGCAAT GAGCACCGTA TTAGCCGGGT AGCGCCAAGA
GCGGACGGTC TGATTGAACT GGACGTTGTC ACGCCGGTAC AGACGCGGTT TCTGTTGGCC
CGCCATGTGG TGCTCGCCAC GGGGCGTGAC GGTCTGGGCG GCCCTTGGGT GCCCGACTTT
GCCCGGCAGT TGCCGGAGCA TTTGTGGACG CATTCGGCGT CGGGTTTGCA GGACAGCTGG
TTCGCCGGCA AGCGCGTTGC AGTCATCGGC GGTGGTGCCT CTGCGATGGA CAGCGCCGCC
ACGGCGCTGG AGGCCGGCGC AACGCGGGTC GATCTGCTGA TCCGGCGCGC CGAGCTGCCG
CGCATCAACA AAGGCAAGGG CGTCGGTAAT CCCGGCATGG TGCATGGCTA CTGGCGCCTG
CCGGACATCT GGAAATGGCG CATTCGCCAC TACCTCAATA CCCAGCAGGT GCCACCGCCG
CGCGGCAGTA CGCTCAGAGT GTCCGCTTCC GGCAAGGCGC GGTTCATGCT CGACAGCCCG
GTGCTTTCCG TCGAACAGAG CGCTGCCGGG GGCGTCTGGC TGAATACGCC GAAGGCGCGT
ATCGAGGCGG ATTTCGTGGT ATTTGCCACC GGGTTTCGCA CCGACTTCCG CCAGCGTCCG
GAGTTTGCGC CATTCTCTGC GCAGATCCGC GTCTGGCAGG ATCGCTTCGA AGCCCCGAGC
GGCGAAACCG ATGCGGAACT GGCTGTGCTG CCGGATCTGG GTAACTGCTT CGAATTTCAG
GAAAAGACCC CAGGCGCCTG CCCGGGGCTG AACCACATTC ACTGCTTCAG TTATCCGGCC
GCGTTGAGCT ATGGCGCGGT GTCCGGGGAC ATTCCTGCCA TCAGCGAGGG CTCCAAACGT
CTGGCCCATG CGCTGGTCGG GCAGTTGTTC AACGAGGACA TCGCCCTGCA TTTCGACACC
ATGCTCGATT ACGCCGAGCC AGAGCTGCTG GGCGATGAGT GGGTCGTCAG CCAGCCAGAC
GCCGCAGAGT TGCGCCAATG A
|
|---|
| Protein sequence | MSDVNAPAGL AALEARLQQD LAWLDLPARP WVKPRISAGQ AVLDVAIIGG GMAGLALSAE
LRNLGVAAVI FDQSPAGFEG PWATTARMET LRSPKQLTGP ALGLPALTFR AWYEAQFGAD
GWALLDKIPR LQWAEYLRWY RKVLALDVRN EHRISRVAPR ADGLIELDVV TPVQTRFLLA
RHVVLATGRD GLGGPWVPDF ARQLPEHLWT HSASGLQDSW FAGKRVAVIG GGASAMDSAA
TALEAGATRV DLLIRRAELP RINKGKGVGN PGMVHGYWRL PDIWKWRIRH YLNTQQVPPP
RGSTLRVSAS GKARFMLDSP VLSVEQSAAG GVWLNTPKAR IEADFVVFAT GFRTDFRQRP
EFAPFSAQIR VWQDRFEAPS GETDAELAVL PDLGNCFEFQ EKTPGACPGL NHIHCFSYPA
ALSYGAVSGD IPAISEGSKR LAHALVGQLF NEDIALHFDT MLDYAEPELL GDEWVVSQPD
AAELRQ
|
|---|
| |