Gene Psyr_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2522 
Symbol 
ID3368039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2930230 
End bp2931660 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content66% 
IMG OID637652870 
Producthypothetical protein 
Protein accessionYP_235599 
Protein GI66045758 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0740789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.855778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGG CCTGTGTCTT GCTGCCGCAA CTGGCGCTGG ACGGCGTCAT GCGTCGTCAC 
GGCAACCCCG ATGAACCGCT GGCGCTGATC AGCGGCAGCG CTCAACGTCG CGTGTTGCAG
AGCGTCAATC CGGCTGCGCG TGCGTTGGGT CTGAAAGCCG GGCAATCGCT GACCGCAGCC
CAGGCGCTGG TGCCCAACTT CACCACGATC GAGCATGACC CGGCCGATAT CGAGCGTTTG
CAGCAACTGC TCGCGGCCTG GGCCTACGGC TTCAGTTCCA ATGTCAGCCT CAAGTACCCG
CGGGTGCTGC TGATGGAAAT CGAATCCAGC CTCAAGCTGT TCGGCCCCTG GCCGGTGTTC
GAGGCGCGTT TGCGTGAAGA GCTGACCACA CAGGGTTTCC GCCATCGCAT CGTGGTCGCG
CCCAACCCCA TAGCCGCGCG AATGCTGGCC AACATGCATG ACGGGCTGAG CATCGACTGT
CCGCATGAAT TGCGTCGCCG TCTGGAGCAG ATGCCACTGG AACGCATCGG CCTGAGCCGC
GACACCGCTA CCGCCCTGAC ACGCATGGGA CTGCGCAGTG TGCGGCAGGT GCTGGCGCTG
CCCCGCGATA CGCTGGCCCG GCGGTTTCCG GCCAGCGTGC TGCAGCACCT TGATACCTTG
CTCGGCGAGC GCCCCGTGGC GCTGGAGTGC TACACGCCGC CGGACTTTTT CGATGTACGC
ATCGAGCTGA ATTTCGACGT CGAGTCCCAT CAGGCCCTGT TGTTTCCGCT CAAGCGGCTG
ATCGCCGATC TGGCCTTGTT CCTGGCCGGA CGCGACAGCG GTGTGCAGCG ATTTTCCCTG
CACCTCGAGC ATGTGCCAGG GCCGGAAACC GTCGTGCCGG AGACTGTCGT ACCGGTCGGG
CTGCTGAGCG CCGAGCGCGA TGCGTCGATG CTCTTCGAAC TGGCCCGCGG CAGGCTGGAG
CAGGTGCTGG TCGCGTCGCC GGTACGTGCC GTGCGCCTGC TGGCGCGAGA CTTGCCGGAT
TTCGTCCCGG CGCACCGTCA GTTGTTCGAT GAGCGCGTGC AGCAGACCTT GCCCTGGGAG
CAACTGCGCG AGCGCCTGCG GGCGCGTCTG GGCGACGAGT CGGTCAATGG CTTGCGCGCC
CAGGCCGATT ATCGTCCCGA ATGTGCCTGG CAAGCGCACA GCAGCAGTAA ACCGGTCCTG
CCAGCCAGAG GCTTCACGCG TCCAGGCTGG CTGCTGCGCG AGCCTCAGCC GCTGCCAGTG
CAGGCGACCC GCATCGTGGC CGGGCCCGAG CGAATCGAAT CCGGGTGGTG GGACGGCGGC
GATGTGCGCC GCGACTATTA CCTGGTCGAA ACCGCCAGTG GCCAACGCGC CTGGGCGTAT
CGCGCGGTTG GCGAGCCGGG TGAACTGCTG CTGCATGGCT GGTTCGCATG A
 
Protein sequence
MLWACVLLPQ LALDGVMRRH GNPDEPLALI SGSAQRRVLQ SVNPAARALG LKAGQSLTAA 
QALVPNFTTI EHDPADIERL QQLLAAWAYG FSSNVSLKYP RVLLMEIESS LKLFGPWPVF
EARLREELTT QGFRHRIVVA PNPIAARMLA NMHDGLSIDC PHELRRRLEQ MPLERIGLSR
DTATALTRMG LRSVRQVLAL PRDTLARRFP ASVLQHLDTL LGERPVALEC YTPPDFFDVR
IELNFDVESH QALLFPLKRL IADLALFLAG RDSGVQRFSL HLEHVPGPET VVPETVVPVG
LLSAERDASM LFELARGRLE QVLVASPVRA VRLLARDLPD FVPAHRQLFD ERVQQTLPWE
QLRERLRARL GDESVNGLRA QADYRPECAW QAHSSSKPVL PARGFTRPGW LLREPQPLPV
QATRIVAGPE RIESGWWDGG DVRRDYYLVE TASGQRAWAY RAVGEPGELL LHGWFA