Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2514 |
Symbol | |
ID | 3368031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2923886 |
End bp | 2924599 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652862 |
Product | ABC transporter |
Protein accession | YP_235591 |
Protein GI | 66045750 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.36817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGAAT CACTGATGGA CATACGCGTC GAGCACAAGG CGTTCGCGGG CAATACCGTG CTGCACGGCA TCGATCTGTC GCTGCAATCA GGTGAAATCG TCAGCCTGTT GGGCCCCAGC GGCTGTGGCA AAAGCACACT GCTGAGGATT GTCGCCGGAC TGGAGCAGGA CTTTCGTGGT TCGGTACAGC GCATTCAGGG CGAAGTGGCG TTCGTGTTTC AAGAGCCGCG CCTGATGCCC TGGCTGACCG TCGCACAGAA TATCGGTTTC AGTGACGATG ATCGCTACGA CCGCCGCTGG GTCGCTCAAT TGATCGAAGA AGTGGGCCTG TCCGGTTTTG CCGATGCCTT GCCCAAAGCG CTGTCCGGGG GCATGGCGCA ACGCGTGGCC ATCGCGCGCG GCCTGTACTC GCACCCGGCG GTGTTGCTGC TGGATGAGCC GTTCAGCGCA GTCGATGCGT TTACCCGGAT GAAGCTCCAG GACCTGCTGC TGCAACTGGC TGCGCGCCAT GCCATTACCC TGTTGCTGGT GACTCATGAT GTTGACGAGG CGTTGTACCT GAGCGACCGC GTGCTGGTGA TGGGCAGCCG CCCCGGCACA ATCACCCACC AATTACCGGT CGGGCTGCAG ACGCCAAGGG ATCGTCGCGA TCCGCTGCTG GCCCGGTTGA AGGCTCAGGC ACTGACCGAA CTGCAACAGG CTCATGTCAT CTGA
|
Protein sequence | MPESLMDIRV EHKAFAGNTV LHGIDLSLQS GEIVSLLGPS GCGKSTLLRI VAGLEQDFRG SVQRIQGEVA FVFQEPRLMP WLTVAQNIGF SDDDRYDRRW VAQLIEEVGL SGFADALPKA LSGGMAQRVA IARGLYSHPA VLLLDEPFSA VDAFTRMKLQ DLLLQLAARH AITLLLVTHD VDEALYLSDR VLVMGSRPGT ITHQLPVGLQ TPRDRRDPLL ARLKAQALTE LQQAHVI
|
| |