| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2492 |
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| Symbol | |
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| ID | 3368009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2899921 |
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| End bp | 2902665 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637652840 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_235569 |
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| Protein GI | 66045728 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.115679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC GTTGCGTTCA TCTGTACCAG ACCTGCAATG TGCTGCCCGT GGTAATACTG
GCAATCATCC CTTCATGGGC CGAGGGCGCC TGCAGCCTTT CCTCCCTGGC ATCGGCTGGC
GTTCAGGTCT GCGACAGCGG CAGCAGCGGG CCGTTTAGCG CGCCGAGCGG TGACCATGTA
CTGATATTTC CGGTCGGCGG AACGGGCACC GTGTCCGGCA ATATCCTGTT CGGTCCGGGA
ATGGACAGCG TGGACATGCA GTCGGGGCGC ATTCTGGGCA ACGTTACTCA AGGGGCCGGT
ATCGACCGCT TCACGCTCTC CACGGGCGAG GTCAGCGGCG ATCTGAACCA GGGCGATGAT
CCCGACGATT TTGTCATGGC CGGCGGCACG CTGGGCTCTC TGGCCCAGGG TGACGGACGC
GATACCTTTC TCATGACGGG CGGCACCATC ACCCGCGCGT TCGAGGATGG CGACGTCGCG
GTGATGACCG GTGGCAGCAT CGGTCGCGTG GACATGAAGC TGGACAACAA TGTATTCGAA
ATGTCTGGTG GCACTATCAT CAACAACCTG GTCACCGGCT TTGGCCGGGA CACCATCACC
TTGTCGGGCG GCATTGTTGG CGGCAACGTC AGCGTCAGTG GCGGCGACGA CCAGATCACC
CTCAGTGGCG GCGAGATCCG CGGCGAAGTT CGCACCAGCG TTGGCAATGA CACTTTCAAC
TGGCTGAACG GCGGTTACGC ACGCAGCAAC GTATTGATGG CCGACGGCAA CGATACGGCA
CGCCTGTACA ACCTGAGCGA ATACTACCTG AGCGCCAACC CGCTGCTCGA CGGCGGCCCT
GGCAACGACG CGTTGACCTT CGACGACACC GTATCATCAC AGCCGGGTCG CTACGCCAAC
TGGGAAACGG TCAATGTGAG CAATGGCTCG CAGCTGAATC TGGCCGGCAC GCTGGTGCTC
GGCGACAGCC TGACTGACAC CGGCGTTCTG GACATAGACT CCAGCAGCAG GCTGATCTCG
ACCTCGGGCA GTGTTGTCCC CTTCAGCGCC GGATCCCTTG CCTCACTGCA GAATGCCGGA
ACGCTGGATC TAAGCGATGC AGGCCGCTCG CTCACTGGCA CATTGACGGT GACCGGCAAT
TACACCGGCC AGAACGGACG ACTGCTGTTG CTCTCGGCAC TGGGCGATGA TGCATCCGCC
AGCGACCGAC TGGTGGTAGC ACAAGGGCGT ATCAGTGGGT CTACGCGCAT GCTCGTCAGC
AACTCGGGTG GGCTGGGCGC CCTGACCCGT GGCAATGGCA TCGAAGTGGT AAAAGCCATC
AACGGTGCAA CCAGCGAAAG CGGCGCCTTT TCGTTGCAAA GTCCGCTGTC TGCAGGCGCT
TATCAGTATT ACCTGTTCAA GGGCGGCGCT ACTGCCGGCT CTGAGAACAG CTGGTTTCTG
CGCTCTGCGG TGATTGCCCC GCCAACGCCA GCGCCGCCCC CTGTCGAGCC CGCCCCGGAA
CCTGCACAGC CAACGCCGCT GCCCGCACCT GCTCCTGAGC CTGAACCAGA ACCAGAACCA
GAACCTGTTC CTGTTCCTGA ACCTGTTCCT GAGCCGACAC CGACACCGAC ACCACAGCCT
GTGCCTGCTC CAGAACCTGC ACCAACACCG CAACCTGTAC CTGCCCCACC TCCAGACCCT
GAGCCTGAGC CGAACAGCCC GCCCCCTGTC ACCCCAGCAG CCGCACTGCC AGTCCCGGCG
ATAGGAACCC CGCCGCTGCC GGAACCCGTT CGCGGAGCTG CACCCATCGC GCTGTACCGG
TCCGAGGTCG CCAACTACTC CGTGGTGGCT CCCACCGCTG CGGTCCTGGC CCTGAGCTCA
CTGGGCACCT TTCATGAGCG TCAGGGGGAT CAAGCCTTGC TGACGCAAAA CGGCACGACG
TCGGCAGGTT GGGCACGCGT GTTCGGCAGC GACTTCAGGC AACGCTGGTC GGGAGACGTG
AGCCCTGGCC TGGACGCTTC ATTCAAGGGT TATCAGATAG GCCATGACCT GTATGCCTGG
CAGCGGGACG GTGGGCAGAC TCAGCGCGTC GGCCTGTTCG TCGCGCATAA CCGTCTGGAC
GGCAAGGTGA AGGGTTTTGC AGAAGGTTTC AGCGACTACG AAACAGGGCG TATGAAACTG
CAGGGCGAGA GCCTGGGCGC CTACTGGACG CTGACCACAC CGAGTGGCGG ATATGTCGAC
GCAGTGGCGA TGGGCACCCG CCTGGACGGT CGCAGCCGCT CTGTCAGAGG CGTAGGCGTC
GACACTGAAG GCAGCGTCAT CAGCCTGTCT GTCGAGGCAG GTTATCCGCT GCCGCTCTCA
CAGCGCTGGG TCGCAGAGCC TCAGGTACAG ATCATCTACC AACGCGTTGA CCTGCAGGAC
CAGCATGACG GCATTGCCCA TCTGAGGTTC GACAGCCAGG CTTACACCAC AGGGCGAATC
GGCCTGCGCT TCAAGGGACA ATATCAAGTG AGCGGCGTAC CGTTAGAGCC TTATCTGCGC
GCCAACCTCT GGCACACCAA AGACGGCCAT GACACGCTGA CCTTTGATCA CGCAGAGCAG
ATAAGAACAG CGCATCGGTC AACGACGGGC AGTATTGGCG CAGGGATGGT AGCGACATTG
AGCAGCAGCG CCAGTCTGCA CTGGAGCGCT GATTATCTCA GTGATCTGGA CGACGACGGA
GCGCAGGGAG TGAACACCAG CCTGGGGTTC AGGCTGGTGT GGTAA
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| Protein sequence | MKIRCVHLYQ TCNVLPVVIL AIIPSWAEGA CSLSSLASAG VQVCDSGSSG PFSAPSGDHV
LIFPVGGTGT VSGNILFGPG MDSVDMQSGR ILGNVTQGAG IDRFTLSTGE VSGDLNQGDD
PDDFVMAGGT LGSLAQGDGR DTFLMTGGTI TRAFEDGDVA VMTGGSIGRV DMKLDNNVFE
MSGGTIINNL VTGFGRDTIT LSGGIVGGNV SVSGGDDQIT LSGGEIRGEV RTSVGNDTFN
WLNGGYARSN VLMADGNDTA RLYNLSEYYL SANPLLDGGP GNDALTFDDT VSSQPGRYAN
WETVNVSNGS QLNLAGTLVL GDSLTDTGVL DIDSSSRLIS TSGSVVPFSA GSLASLQNAG
TLDLSDAGRS LTGTLTVTGN YTGQNGRLLL LSALGDDASA SDRLVVAQGR ISGSTRMLVS
NSGGLGALTR GNGIEVVKAI NGATSESGAF SLQSPLSAGA YQYYLFKGGA TAGSENSWFL
RSAVIAPPTP APPPVEPAPE PAQPTPLPAP APEPEPEPEP EPVPVPEPVP EPTPTPTPQP
VPAPEPAPTP QPVPAPPPDP EPEPNSPPPV TPAAALPVPA IGTPPLPEPV RGAAPIALYR
SEVANYSVVA PTAAVLALSS LGTFHERQGD QALLTQNGTT SAGWARVFGS DFRQRWSGDV
SPGLDASFKG YQIGHDLYAW QRDGGQTQRV GLFVAHNRLD GKVKGFAEGF SDYETGRMKL
QGESLGAYWT LTTPSGGYVD AVAMGTRLDG RSRSVRGVGV DTEGSVISLS VEAGYPLPLS
QRWVAEPQVQ IIYQRVDLQD QHDGIAHLRF DSQAYTTGRI GLRFKGQYQV SGVPLEPYLR
ANLWHTKDGH DTLTFDHAEQ IRTAHRSTTG SIGAGMVATL SSSASLHWSA DYLSDLDDDG
AQGVNTSLGF RLVW
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