Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2374 |
Symbol | |
ID | 3367889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2752948 |
End bp | 2754252 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637652720 |
Product | sensor histidine kinase |
Protein accession | YP_235451 |
Protein GI | 66045610 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.171494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.151024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGACT TCGCTCGCCG ACGTGGCAGC CTGCATCGCC TCGTCAGCGT GATAATTCTC GGTTTCGGGC TGCTGATGAC CACCGGCCTG ACCACCCTCG CGTTCATGAG CCAGGACCTT GTTGATCATC CGATCTGGAA GGATCTGCTT GAGACCGCGA CCGCCAACAC GCTTGCAGAC GACGTGCTGC CCGCGGCGCA GAAAGACGCC AGGATCCAGG TCTGGAAACT GTCAGGCAGC ACGCCGGCAG CCGGCATGCC GCCCTCTCTC GCTGCACTCG CACCTGGCTA TTACAGTGAG GGCGATCTGG ACCGCCAGGA CGCTGACAAT GGCGATCGCG ACTATGCGGT GCTGGTGACC TCGCTTGGCA GAGAGCGCCT GATCGCCGCC ATCGACATCA GCGATCTGGA GCGGGAGCAG AACTTCATCG CGCTGGTGGG GGCGATGTTT CTGGTACTCA ATCTGATTCT GATCATTGCT GTGATCGCCT GGTTGTACGT GCGCCTGCAT CTTCCGGTTC AGGGGCTGGC ACTGGGCATG AAGCAACTCG ACCCGGAGCG CCCCGCCCAG CGATTGCCAG TGCACTACGC TCAGGAAGAG CTCAAGGACA TTGCCTGCGG AATCAACGCG CACCTGGAAC GGGTCGAACA ATTCATGGCC CGCGAACGCG CGCTGCTGGA TCAGGCCAGC CACGAATTCC GCACGCCTAT CGCCGTGATC AGCGGTGCGC TGGATATCCT CGCCAGGCAA AAACTGCCGC CGCGTGCAGC GCCGCCACTG CAACGCATGC GAGCCACCGT GGAAAACCTG ACGGAAATCA TGGTTGCGCT GCTTTACCTG TCGCGTGAGC CGTTGACCTC CAACCGGGAT GACCCGATCG AGCTTGATCG TCTGCTGCCC GGCCTGGTCA AGGATCATGA GCATTTGCTC GACGGCAAGC CGGTGAAGTT CTCGGTGCAG ATCCACCAGA CCCTGACTCT GCACGTGCCG GAAGCAATGC TACGCATTGC CGTCGGCAAT CTGTTGCGCA ATGCGGCAGA TAACACCTAC GACGGCACCA TCGCTGTGCG ACTCAAGGAT GATGTGTTGA GCGTGACCGA TTCGGGTGAA GGGTTCGACA CCGAGCAGGC TTCCCGGCAT TACCTGTCGC TGCTGAGGAA CCCGATCAGG ACGGGCAGTG GCAAAGGCCT CGGGCTGTTT CTGGTGCGAC GTATCTGTGA ACGCTTTCAG TGGACACTGA CGCTGGAGTC AATGCCGACG CTGGGCACCC GGGCAGGACT CGACTTCCGC AGTCGGCCGG TTTGA
|
Protein sequence | MIDFARRRGS LHRLVSVIIL GFGLLMTTGL TTLAFMSQDL VDHPIWKDLL ETATANTLAD DVLPAAQKDA RIQVWKLSGS TPAAGMPPSL AALAPGYYSE GDLDRQDADN GDRDYAVLVT SLGRERLIAA IDISDLEREQ NFIALVGAMF LVLNLILIIA VIAWLYVRLH LPVQGLALGM KQLDPERPAQ RLPVHYAQEE LKDIACGINA HLERVEQFMA RERALLDQAS HEFRTPIAVI SGALDILARQ KLPPRAAPPL QRMRATVENL TEIMVALLYL SREPLTSNRD DPIELDRLLP GLVKDHEHLL DGKPVKFSVQ IHQTLTLHVP EAMLRIAVGN LLRNAADNTY DGTIAVRLKD DVLSVTDSGE GFDTEQASRH YLSLLRNPIR TGSGKGLGLF LVRRICERFQ WTLTLESMPT LGTRAGLDFR SRPV
|
| |