Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2369 |
Symbol | |
ID | 3367884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 2746798 |
End bp | 2747946 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637652715 |
Product | aldose 1-epimerase |
Protein accession | YP_235446 |
Protein GI | 66045605 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0104312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.855778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC ATGCGCTTCT CAGCACCCTT GGACTGTCCT TGATGATCAG CACCCTGACC GCACAGGCCG CCGCACTCTC CAGCGAACAC AGCGCGTTCG GCCAACTGCC CGACGGCTCT GCCGTCGAAA AATACACCCT GCGCAACAGT CACGGCGTGC AGGCCAGCAT CATCACCTAC GGCGCGACGC TGCAATCGCT GCTGGTACCT GACAAGGCCG GCAAGGTCGA AGACATCGTC CTGGGTTTCG ACGATGTGCA GGGCTACCAG AACAACGGTA CGGTCTATTT CGGCGCGACC ATCGGCCGCT TCGGCAACCG GCTGGCAGGC GGCAAATTCA GTCTGGATGG CAAAACCTAT CAGGTCCCGC TCAATGACAA GACCAACGCG CTGCACGGCG GCACGCAGGG TTTTGACAAG CGTCTGTGGA AGGCAGAAGA AACCAAGAGC GGTGATTCGG TCGGCGTGAA GCTGACCTAC CTGTCGCCGG ACGGCGAGAT GGGCTTTCCG GGTGCCCTGC TGACTGAAGT GACCTATAGC CTGAATGAAA AAAACGAGCT GAAGATCGAC TACCGCGCCA CCACCGACAA ACCGACGGTG CTGAACCTGA CCAACCACAG CTATTTCAAC CTGGCCGGCG CTGGCAGTGG TGATGTGCTC AAACAGGTCG CCACCCTTCA CGCCTCGCAC TACACCCCGG TCAACGACAA GCTGATCCCG ACCGGTGAAC TGCCTGCTGT GGCTGGCACG CCCATGGACT TTCTCAAGCC CACCGCGTTC GGCAAACACA TCAAGGCTGA TCACCAGCAG TTGAAATACG CCGAACCCAA GCAAGGCGGG TTTGATTTCA ACTGGGTGCT CGACACCAAG GGTGATGTGA AGAAACTGGC CGCCGAGGTC AGCGATCCGC AATCAGGCCG CAGACTGCAA CTGTTCACCA CAGAGCCCGG CGTGCAGCTG TACACCGGTA ACTTCCTGGA TGGCAGCATT CACGGCAAGG CAGGCAAGGT CTACCCGCAC TGGGGCGCCT TTACCCTGGA AACGCAGCAC TACCCCGATG CACCCAACCA GCCGAAATTC CCCAGCACCC GACTGGATCC TGGCAAGGCC TACACCCAGA CGACTGTGTT CAAATTCCTC AACGACTAA
|
Protein sequence | MKKHALLSTL GLSLMISTLT AQAAALSSEH SAFGQLPDGS AVEKYTLRNS HGVQASIITY GATLQSLLVP DKAGKVEDIV LGFDDVQGYQ NNGTVYFGAT IGRFGNRLAG GKFSLDGKTY QVPLNDKTNA LHGGTQGFDK RLWKAEETKS GDSVGVKLTY LSPDGEMGFP GALLTEVTYS LNEKNELKID YRATTDKPTV LNLTNHSYFN LAGAGSGDVL KQVATLHASH YTPVNDKLIP TGELPAVAGT PMDFLKPTAF GKHIKADHQQ LKYAEPKQGG FDFNWVLDTK GDVKKLAAEV SDPQSGRRLQ LFTTEPGVQL YTGNFLDGSI HGKAGKVYPH WGAFTLETQH YPDAPNQPKF PSTRLDPGKA YTQTTVFKFL ND
|
| |