| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2321 |
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| Symbol | |
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| ID | 3367836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2696813 |
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| End bp | 2698315 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637652668 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_235399 |
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| Protein GI | 66045558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0122033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.914801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATGGA CTAAGATGAG ATATAAAATA GTTGGTTTTC TGCTCATCGT CGGCCTTTCT
ATTGCGGGAC CTGTTGAGGC TTTAGAATTT AACGTTTGGC GGCAGGCGGG CGGCGTTCCT
GATTTTTCAG ACTCGCGACA AGGATGTGAT TTTCTTATGG GGGTTTTTTC GCCAAGTCTT
GCTACCTACT ACGCACCCCA GTTTAATAAG TTTGAAGGTG ATTCATTTCA ATGTGGTATC
CAATACCCTG ATGGTGCTGT TAGGTGGGTT GGTGGTTTTC TTCCCATCGT GTTAGATTGC
CTGAATGGCT CTTCGTTAGG GATATTCAAC GCTAGTTGCG CTTTTAATGT GCAAAAAGGA
AGTCCTCAGG AGGAAGGTCT CTGCTCCAAC AAGTCTTCAA GTGTAGGCAA TCCGATAAAT
GCAGCTAATG GAAATAAGTA CCAGGTGGAA ATGGATTTGA GTTTGGGGTA TTTGAATCCA
ATAGTTATCT CTCGTACTTA TAATAGTATG GATGGCGTGT GGCGTCACAA TTTCTCTTCA
TCGCTTTATT TTGGTGTTGA TGCTGTAGTG GTCGTGCATG TGGATGGTCG TGAAGCAATT
TTTCAACTGG AACGTCGGGG GTATCGTTCC AATACGGATT TGGGTGTGCT GACGAAAATG
ACAAATGGCT GGAGCTATCA AAGCCCTGCA GGTCAGATGC TTTCTTTTTC TACGCAAGGG
CAGTTGCTGC GTATAGATAA TTCAAATGGG AGTTTCTACA GATTAAGCTA TCGAGACTTG
GGTGCTGACA GAGCTATTGA AATTGATAAT GGTTTTGGTC AGAGCGTACA GCTCACCGAG
GCGCCTATGC ATCAGCTCAG GAAGGTCATA TCTAAAGCTA TAACTATTGA ATATGAATAT
TCATCTATGC AGTTAAGTAA GCGGACCACC ACTATGGGAT CTCTAATTTC TACTCGTGAG
TATCTCTATG AGGATGGTAG AAGCGCGCGT TTACTAACCG GTATCACTGA TGAGCGCGGA
GTCAGATTTG CAACTTGGGC GTACGATGGG CAATATCGTG CGGTGTCAAG TCAGCACACT
GGTGGTGTGG GTTTGACGAT GATTACTTAT AATAGTGATG ACTCCACTGC TGTGATAAAC
GAGTTAGGCA AAAAAAGTAT ATTTCGTTAC CAGCAAATTT CAGGCGTAAA ACGTATTGTC
GCCATCGAAG GGGAACCTAC CCCTGACTGC CCAGCCAGCA ATTCCTCCTA CACCTACAAC
GACCGTGGCC TCGTGCTAAC CAAAACCGAT GCCAAGGGCC TGATCACAAC CTATTCCTAC
AACGACCGAG GCCTGGAAAT CAGCCGCACC GAGGCTACCG GCACTACGTT GGCGCGCACC
ACTAAAACGG AATGGGACCC TGATCGTTTT CTCCCAATCA AGGTAATTGA ACCCAATCGC
ATCACTGTGT ATAGCTACGA CAATCAAGGA CGTGAGCTCA GTCGGCAGAG CACATCCCGA
TGA
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| Protein sequence | MVWTKMRYKI VGFLLIVGLS IAGPVEALEF NVWRQAGGVP DFSDSRQGCD FLMGVFSPSL
ATYYAPQFNK FEGDSFQCGI QYPDGAVRWV GGFLPIVLDC LNGSSLGIFN ASCAFNVQKG
SPQEEGLCSN KSSSVGNPIN AANGNKYQVE MDLSLGYLNP IVISRTYNSM DGVWRHNFSS
SLYFGVDAVV VVHVDGREAI FQLERRGYRS NTDLGVLTKM TNGWSYQSPA GQMLSFSTQG
QLLRIDNSNG SFYRLSYRDL GADRAIEIDN GFGQSVQLTE APMHQLRKVI SKAITIEYEY
SSMQLSKRTT TMGSLISTRE YLYEDGRSAR LLTGITDERG VRFATWAYDG QYRAVSSQHT
GGVGLTMITY NSDDSTAVIN ELGKKSIFRY QQISGVKRIV AIEGEPTPDC PASNSSYTYN
DRGLVLTKTD AKGLITTYSY NDRGLEISRT EATGTTLART TKTEWDPDRF LPIKVIEPNR
ITVYSYDNQG RELSRQSTSR
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