| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2320 |
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| Symbol | |
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| ID | 3367835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2695281 |
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| End bp | 2696807 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637652667 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_235398 |
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| Protein GI | 66045557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0339952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.953507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGGT TTATTGTTTT TGAATGTGGT TGTATTTCGG CTTTTCGGTC TTCAGTTATA
GGGGTTTTTG TTTTTTCTTC TGCTTTTTCA GTGGTGGCTG CCGCTGATAC CTATAGCTAT
TGGTGGGAGC CTAACAGTCA ATTAGGATTT AACGATCCCC GTAAGGCGTG TGACTACCTA
TACTCAGAGT ATTATTGGTC TCATTTGATT TCTAATTACA GGCCTGAGCT GAATCGTTAT
CGTGCCGGAG TTTACGACTG TGGATGGAAC GATGGCGTTG AGGATGGTCA TTTTGGCGGT
GCCCAGTTTA CGACTGTAGA TTGCGATATT GATACATCAC CTGATCGCCG TACAAAGAGT
TGCAGTAGTA AGGCTCAGGT GGGTAATCCA ATAGAAATTG CCTCATGCTC AAATCCTTCT
TCTGGTGTAG GTAATCCACT AAATGCTGCC AACGGCAACA AGTATCAGGA AGAAATTGAT
TTTAAAAGCG GCGGGGCAAA CCCTATCATT ATTGGTCGCT CATACAATAG CTTGGATGGA
GTATGGAGGC ATAATTTTTC TACATCACTG TACTTTGGGA GTAAGACGGT AGTTTTGGTC
AGCGCGGATG GTCGTGAGTC GATATTTTTG ACAGATGGTC GAGAATATAG GTCTAGCACT
GATTCTGGTA TATTGATCGC TCAGGCTGAT GGTTGGCTAT ATAGATCTTC TGCGAATATA
GAAATGTATT TTACATCTAA GGGTTACCTG AGTTCGGTGA CTGCTCTTAA TGGTGATAAG
TACACGTTAA CATACCGGCA TCAAAATGCA GATCGTGTAA TAGCTATTGA TAATGGGGTG
GGAGTGATGG TTGAATTGAT TGAGGATCCT CTTCATCAGC TTAAAGCTCT CTCTGCTGGC
CCTAAGAAAG TTGCATATCT TTATGGCTCT CGGCGACTGT TGAAGCGTGC TACGACCATG
GGGAGCTTTG TCTCAGTCCG TGAGTATCAT TATGAAGATA GTCGAAATAA CAGTTTGCTA
ACTGGTATTA CCGACGAGAG AGGAGTTCGT TTTGCTACTT GGAGCTACGA TGTTCAAGGC
CGCGCTGTGT CCAGTCAGCA TGGTGATGGC GCTGGCCTAA CTCAGATCGC CTACGGTGAG
GATGGAGCCA GTACGATCAC GAATGAGCTC GGCAAGCAGA CCATTTATCG CTACCAAAAA
ATCTCCGGAG TAAAACGAAT TGTTGCTATT GAGGGGGAGC CTACCCCTGA CTGCCCAGCC
AGCAACTCCA CTTATACTTA TAACGACCGT GGCCTCGTGC TCACCAAAAC TGATGCTAAA
GGCTTGGTCA CTACCTACGA CTACAACGAC CGAGGCTTGG AGGTCAGCCG TACCGAGGCC
AGTGGTACTA CTTTAGCGCG CACCACCACA ACGGAATGGG ATCCTGATCG TTTTCTCCCG
ATCAAGGTAA TTGAACCCAA TCGAATCACT GTGTATAGCT ACGACAATCA AGGACGTGAG
CTCACTCGGC AGAGCGCATC CCGATGA
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| Protein sequence | MFRFIVFECG CISAFRSSVI GVFVFSSAFS VVAAADTYSY WWEPNSQLGF NDPRKACDYL
YSEYYWSHLI SNYRPELNRY RAGVYDCGWN DGVEDGHFGG AQFTTVDCDI DTSPDRRTKS
CSSKAQVGNP IEIASCSNPS SGVGNPLNAA NGNKYQEEID FKSGGANPII IGRSYNSLDG
VWRHNFSTSL YFGSKTVVLV SADGRESIFL TDGREYRSST DSGILIAQAD GWLYRSSANI
EMYFTSKGYL SSVTALNGDK YTLTYRHQNA DRVIAIDNGV GVMVELIEDP LHQLKALSAG
PKKVAYLYGS RRLLKRATTM GSFVSVREYH YEDSRNNSLL TGITDERGVR FATWSYDVQG
RAVSSQHGDG AGLTQIAYGE DGASTITNEL GKQTIYRYQK ISGVKRIVAI EGEPTPDCPA
SNSTYTYNDR GLVLTKTDAK GLVTTYDYND RGLEVSRTEA SGTTLARTTT TEWDPDRFLP
IKVIEPNRIT VYSYDNQGRE LTRQSASR
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