| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2185 |
|---|
| Symbol | |
|---|
| ID | 3367700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2539050 |
|---|
| End bp | 2539982 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637652535 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_235266 |
|---|
| Protein GI | 66045425 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAA AACGTCCGGT CATCATTACC TGCGCCGTAA CGGGTGCAAT TCACACGCCG
TCGATGTCGC CTCATTTGCC GATCACGCCG CAGGAAATCG CCGATGCAGC CATCGGTGCC
GCCGAGGCCG GGGCCTCGAT CGTTCATTTG CACGCCCGCG ACCCGCAGGA CGGAAGGCCC
AGTCAGGATG TCGACCTGTT TCGGCAGTTC CTGCCGCAGA TCAAGGCCAA GAGCGACGTG
GTGATCAATA TCACCACGGG CGGCGCGCCG ACCATGGGCG TGGAAGAGCG CTTGCAACCG
GTCGCGCAGC TCAAGCCGGA ACTCGCCTCG CTGAACATGG GATCAATGAA CTTCGGTCTG
TATGAAATGC TGGATCGCTA CAGCGAGTTC AAGCACGACT GGGAGCGGCC CTATCTGGCC
GAGAGCGACG ACCGGATTTT CCGCAACACC TTCCGCGACA TCGCGCACAT TCTCAATACC
TGTGCCGAGA ACCGTACACG CTTTGAAATT GAATGCTATG ACATCGGCCA TCTGTATACC
GCAGCACACT TCCTGCAGCG TGGGTTGCTC AAGGCGCCGA TTTTCATCCA GTCTGTATTC
GGTTTGCGCG GCGGGATCGG CGGACACCCT GAAGACCTTG CGCACATGCG CCGTACGGCT
GACCGCCTGT TTGGCGATGC CTATCAGTGG TCGATCCTGG GGGCCGGTCG CAATCAGATT
CCGCTGGGCA CCATGGGCCT GTCGATGGGC AGCCATGTAC GGGTCGGTCT GGAGGATTCG
CTGTGGGACG GGCCGGGCAA ACTGGCGGCG TCCAATGCCG ATCAGGTCAA GCGTATCCGC
ACGGTGATCG AAGCGCTGGG CGGGCAGGTG GCAACGCCGG ACGAAGCCCG TGAAATGCTC
GATCTGAAGG GGCAGGACAA GGTTGATTTC TAG
|
|---|
| Protein sequence | MPKKRPVIIT CAVTGAIHTP SMSPHLPITP QEIADAAIGA AEAGASIVHL HARDPQDGRP
SQDVDLFRQF LPQIKAKSDV VINITTGGAP TMGVEERLQP VAQLKPELAS LNMGSMNFGL
YEMLDRYSEF KHDWERPYLA ESDDRIFRNT FRDIAHILNT CAENRTRFEI ECYDIGHLYT
AAHFLQRGLL KAPIFIQSVF GLRGGIGGHP EDLAHMRRTA DRLFGDAYQW SILGAGRNQI
PLGTMGLSMG SHVRVGLEDS LWDGPGKLAA SNADQVKRIR TVIEALGGQV ATPDEAREML
DLKGQDKVDF
|
|---|
| |