Gene Psyr_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2172 
Symbol 
ID3367687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2525443 
End bp2526288 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content56% 
IMG OID637652522 
Producthypothetical protein 
Protein accessionYP_235253 
Protein GI66045412 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.885506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA GTTCCGATTT TTCCGCCTGG ATTGGACGAC GTCAGGAAAG CCAGGACCGG 
ATCAGTTTCA CTCTGGTCAG ACGCATTGCC GCGACATTGG GCGAGTCGGC ACCAAAACCC
GGTGAGCCGC TGCCGCCCCT GTGGCACTGG GCATTTTTTC AGGAGCCGGT GGGTGCCAGC
GAACTGGGGC CGGACGGCCA TCCAGCGCTG GGGGGATTTT TGCCGCCGGC CCATAACCAC
AATCGCATGT GGGCGGGAAG CCGAATTGAG TTTTTCCAGC CATTAAGAGT GGATGCTGAA
GTGACCTGTG TATCGACCAT CCTCAACGTC GAGGAGAAGC ACGGTCGCAC GGGTTCCTTA
TTGTTCGTCA CAGTACGCCA TGAGTTTTTC CAGGACGGCA AACGCGCCCT TCAAGACGAT
CAGGACATTG TTTACCGTGA AGCTTCCCCG CCCAAACTGA ACGGTACCGA AACGTTACCT
GAAGGCCAAT GGCAGGAACG GATAGAACCC ACTCCAACCC TGCTGTTTCG CTATTCCGCA
GTGACCTTCA ATGGTCATCG TATTCACTAT GACTGGCCGT ATGTGACAGA GACCGAAGGT
TATCCGGGGC TGGTGGTACA TGGTCCATTG ATCGCCACGT TGAATTTGCG TGCCTTTACC
AAAGCGCATC CAGCTGCGCG TCTGGAGCGT TTCGCATTCC GCGGAGTACG ACCTCTGATT
TCGCCTAAGC CTTTCGAGGT GGGCGGACGT CTAATCGAAA ACGGCAAGGC ACAGGTCTGG
GCTGGCAATC AGGACGGCAC TGCACAGATC GGAGAGATCG AGTTCAGCAA TGGAGCAACG
CCATGA
 
Protein sequence
MSNSSDFSAW IGRRQESQDR ISFTLVRRIA ATLGESAPKP GEPLPPLWHW AFFQEPVGAS 
ELGPDGHPAL GGFLPPAHNH NRMWAGSRIE FFQPLRVDAE VTCVSTILNV EEKHGRTGSL
LFVTVRHEFF QDGKRALQDD QDIVYREASP PKLNGTETLP EGQWQERIEP TPTLLFRYSA
VTFNGHRIHY DWPYVTETEG YPGLVVHGPL IATLNLRAFT KAHPAARLER FAFRGVRPLI
SPKPFEVGGR LIENGKAQVW AGNQDGTAQI GEIEFSNGAT P