| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2074 |
|---|
| Symbol | |
|---|
| ID | 3367588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2419564 |
|---|
| End bp | 2420535 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637652423 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_235155 |
|---|
| Protein GI | 66045314 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.136591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0111283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTG ATTCCCGTGG TCCGCGCGTC GGCATCATTG GTACGGGTGC CATCGGTGGC
TTTTACGGAC TGATGCTGGC GCGTGCCGGA TACGATGTGC ATTTTCTGCT GCGCAGCGAG
TTTGACACGG TGGCGCGCGA AGGTTTGCAG GTCAAAAGCG CCGTGCACGG CGAGCTGTCC
CTCAAGCCCG TTCAGGCGTA TCGCTCGGCG GCTGAAATGC CGCCTTGTGA CTGGCTGCTG
GTCGGCACCA AGAGCACCGG CAATGCCGCG CTCGGTCCGA TCATCCGTCA GGTGGCTGCG
CCGAATGCCA GCGTGCTGCT GTTGCAAAAC GGCCTGGCTG TCGAAGACCA ACTGCGTAAC
GTCCTGCCCG ACAGCCTGCA CATACTCGGC GGGCTGTGTT TCGTCTGCGT CAACCGGGTT
GCGCCCGGCG TCGTCGCCCA TGAAGCCTTC GGTGCGGTCA GTGTCGGCTA TCACAGCGGC
CCGGCGGACG ATGAGGCGAG CCGCATGGCG GTCGTCGAAG CCTGCGCGGC CCTGTTCAAG
ACGGCCGGCA TCGACGCGCC GGTCATGGCC AATCTGCAGC AGGCCCGCTG GCAGAAGCTG
GTCTGGAATG TGCCCTATAA CGGGCTGTCG GCCTTGTTGC AGACCAGTAC CGGTCGATTG
ATGGCCGATC CTGACAGCCA GGCCTTGATC CGGGCGCTGA TGGACGAGGT CGTGCAGGGG
GCCGAGGCCT GCGGGCACAC CTTGCCGCCG GGTTTCGCGC AGCATCTGTT TACAGTGACC
GAAAACATGC CGGATTACAG GCCCAGCATG TACCACGACC TGGCCGAAAG ACGCCCGCTG
GAGCTGGACG CCATTTATGC CCGGCCCCTT GCGGCGGCGC TTGCCGCCGG GTTTGACATG
CCCCGCGTGC GGGCGCTTTA TCAGGCACTG GCGTTCATCG ATCGGGGCAA CCGCCCGGCA
AGCAAGGAGT GA
|
|---|
| Protein sequence | MSVDSRGPRV GIIGTGAIGG FYGLMLARAG YDVHFLLRSE FDTVAREGLQ VKSAVHGELS
LKPVQAYRSA AEMPPCDWLL VGTKSTGNAA LGPIIRQVAA PNASVLLLQN GLAVEDQLRN
VLPDSLHILG GLCFVCVNRV APGVVAHEAF GAVSVGYHSG PADDEASRMA VVEACAALFK
TAGIDAPVMA NLQQARWQKL VWNVPYNGLS ALLQTSTGRL MADPDSQALI RALMDEVVQG
AEACGHTLPP GFAQHLFTVT ENMPDYRPSM YHDLAERRPL ELDAIYARPL AAALAAGFDM
PRVRALYQAL AFIDRGNRPA SKE
|
|---|
| |