| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2045 |
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| Symbol | |
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| ID | 3367559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 2389505 |
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| End bp | 2389768 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637652394 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_235126 |
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| Protein GI | 66045285 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.242021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.525441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCGCG ACAATGGAAA ACCACCCGGC ACCACGCCGC CTTCCCAAGT CACACCCGCC
ATCGTCCAGT TGACTGTCAA GGAACGACAA GTCCTGGAAT GGGTGGCGCT CGGCAAATCC
GCCTGGGAAA TATCACGGAT ACAAGGGTGC TCGGAAGCGA CCGTGCACTT TCATACCAGC
AATATCCGCC GCAAGTTCGG AGTGACGTCA TTGAAGGCGG CGCTGGTGAT GGCGATCAGG
CAGGGGGTTA TTTTGGTGGA GTGA
|
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| Protein sequence | MLRDNGKPPG TTPPSQVTPA IVQLTVKERQ VLEWVALGKS AWEISRIQGC SEATVHFHTS
NIRRKFGVTS LKAALVMAIR QGVILVE
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