Gene Psyr_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1942 
Symbol 
ID3367452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2215461 
End bp2215985 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content59% 
IMG OID637652287 
Producthypothetical protein 
Protein accessionYP_235023 
Protein GI66045182 
COG category[S] Function unknown 
COG ID[COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.59061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA AATTGACCGC CCTGGCCCTG TTGCTGGCTG TAAGTGCACC GATGGTTCAC 
GCTGCTGCCG AGCCGTCCGG CTATACCTAC CGCATGGTGG CCGAGACGCC AAGCAATGTG
AACGACAAGG AGATCGCCGG TCTGTTTGAT CGCTGGAACA AGGCCCTGCA AACCGGAAAC
TCCACTACCG TCGCATCGTT GTACGCGCCG GACGCTGTCC TGCAGCCTAC GGTCTCCAAC
AAAGTGCGTG CCACTCCGGC AGAGATCAAG GACTACTTCG ACAAGTTCCT GGCACTCAAG
CCGATTGGCG AGATCAACTA CCGGGAGATT CGTCGCCTGG GGCCTGATGC CGCAGCGGAC
AACGGTGTCT ACACCTTCAC GTTGACGGCG CCGGACGGCA AGAAGACCAA GGTGCAGGCA
CGTTATTCGT TCCTCTACCA CCGCGTCGGC AACGAGTGGA AGATTCTCAA CCACCACTCC
TCGGCGATGC CGGAAGTGCA GCCCGAGTAT CAGGTCAGCC GCTGA
 
Protein sequence
MKTKLTALAL LLAVSAPMVH AAAEPSGYTY RMVAETPSNV NDKEIAGLFD RWNKALQTGN 
STTVASLYAP DAVLQPTVSN KVRATPAEIK DYFDKFLALK PIGEINYREI RRLGPDAAAD
NGVYTFTLTA PDGKKTKVQA RYSFLYHRVG NEWKILNHHS SAMPEVQPEY QVSR