Gene Psyr_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1913 
Symbol 
ID3367423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2187398 
End bp2187883 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID637652259 
ProductSulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_234995 
Protein GI66045154 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00146043 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACCG GTAGAATCCA GTTCGCCGAG CAGGAAGGCA CCTTCGTTCT CAAGTTCGTG 
GGTGAAGTGC GGTTGACGCT GTGTTCGGCC CTGGATGCGA CTATCGAGCG CATCTTCACT
GCGCTGAATT TCTCTGCGGT GGTCATTGAT CTGACCGAGA CGCGCAGCAT TGACAGCACC
ACGCTGGGCC TGCTGGCCAA ACTGTCGATT CTGTCGCGCC AGAAGGTAGG CCTGTTGCCG
ACCCTTGTGA CCACTCACGA GGACATCACG CGCCTGTTGC AGTCGATGGG CTTTGATCAG
GTCTTCAACA TCGTTGACCG GCCTCTGCCG CGGCCTGAGT GCCTGACTGA TCTGCCTTCA
CAGGACCAGT GCGAAGAAGT GGTGAAAGCC AAGGTGCTTG AGGCGCACAA GATCCTCATG
GGCCTCAACG ACTCCAATCG TGAAGCGTTC CATGATCTGG TCAATGCACT GGAAGGTCAG
CGCTAG
 
Protein sequence
MSTGRIQFAE QEGTFVLKFV GEVRLTLCSA LDATIERIFT ALNFSAVVID LTETRSIDST 
TLGLLAKLSI LSRQKVGLLP TLVTTHEDIT RLLQSMGFDQ VFNIVDRPLP RPECLTDLPS
QDQCEEVVKA KVLEAHKILM GLNDSNREAF HDLVNALEGQ R