Gene Psyr_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1875 
Symbol 
ID3367384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2150370 
End bp2151059 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID637652223 
Productenoyl-CoA hydratase 
Protein accessionYP_234960 
Protein GI66045119 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC TGGTCTCGTA CCATCTGGAC GACGGTGTCG CCACGCTGAC CCTGAACAGC 
GGCAAGGTCA ATGCCATTTC CCCGGACGTG ATCGTTGCGT TCAACGCCGC ACTGGATCAG
GCCGAAAAGG ATCGGGCCAT CGTTATTCTC ACCGGCCAGC CGGGCATTCT GTCGGGCGGC
TACGACCTCA AGGTCATGAC CTCCAGCGCC GAGGCCGCGA TCGAGCTGGT CGCACAGGGC
TCGACGCTGG CACGGCGCAT GCTGTCGCAC CCCTTCCCGA TCATCGTCGC CTGCCCCGGC
CACGCGGTTG CCAAGGGCGC CTTTCTGCTG CTGTCCGCCG ATTATCGAAT CGGTGTCGCC
GGGCCGTTCA GTATCGGCCT GAACGAAGTG CAGATCGGCA TGACCATGCA CCACGCCGGC
ATCGAACTGG CGCGCGACCG CCTGCGCAAG TCGGCTTTCA ATCGCTCGGT AATCAACGCC
GAGATGTTCG ACCCTGAAGC AGCGATGGCC GCCGGTTTCC TCGACCGGGT GGTCAGCATC
GAAGAGCTGC AAAGCACCGC GCTGGCCGTC GCCGGGCAGT TGAAGAAGAT CAATATGAGC
GCGCACAAGA AGACCAAACT CAAGGTCAGA AAGGCTTTGC TCGACACGCT GGAGGCCGCG
ATCGAACAGG ATCGACAGCA CATGCTGTGA
 
Protein sequence
MSDLVSYHLD DGVATLTLNS GKVNAISPDV IVAFNAALDQ AEKDRAIVIL TGQPGILSGG 
YDLKVMTSSA EAAIELVAQG STLARRMLSH PFPIIVACPG HAVAKGAFLL LSADYRIGVA
GPFSIGLNEV QIGMTMHHAG IELARDRLRK SAFNRSVINA EMFDPEAAMA AGFLDRVVSI
EELQSTALAV AGQLKKINMS AHKKTKLKVR KALLDTLEAA IEQDRQHML