Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1860 |
Symbol | |
ID | 3367369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 2136914 |
End bp | 2137459 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637652208 |
Product | ankyrin |
Protein accession | YP_234945 |
Protein GI | 66045104 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.43131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA CAGATATCAG CGCTTCGAAA ACCATGACTG AAGACGAAGC TGCCGAGTTC GCCGAGCAGG TATTCGATGT GGCTCGCCAG GGGAATGCCG TCATGCTCGA GCGTCTGCTT GAAAAGGGCC TGCCGGCAGA TCTGCGCAAC CACAAGGGCG ATACGCTGCT GATGCTGGCC AGCTATCACT GCCATGCGGA TGCGGTCCGT GTGCTGCTGA ACCACAAGGC TGATCCTGAA ATCCGCAACG ATAATGGCCA AAGCCCCATC GCCGGCGCAG CGTTCAAGGG CGATCTGGCA GTGGTCAGGT TGCTGGTCGA GGCGGGTGCC GATATAGACG GTGCCTCTGC TGATGGCCGT ACCGCATTGA TGATGGCCGC GATGTTCAAC CGCAACGAGA TAGTCGATTA CCTGATCAGT CAGGGCGCGG ACCCGCATGC CACCGATGCC AAGGGCATCA CTGCACTGGG CGCCGCTCAG GCAATGGGCG CGACCGTCAC CATCGAGCAG TTGAGCAAAA TGGGCGTGCA GCCAGCCCGG TCCTGA
|
Protein sequence | MTDTDISASK TMTEDEAAEF AEQVFDVARQ GNAVMLERLL EKGLPADLRN HKGDTLLMLA SYHCHADAVR VLLNHKADPE IRNDNGQSPI AGAAFKGDLA VVRLLVEAGA DIDGASADGR TALMMAAMFN RNEIVDYLIS QGADPHATDA KGITALGAAQ AMGATVTIEQ LSKMGVQPAR S
|
| |