| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1855 |
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| Symbol | |
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| ID | 3367364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2133261 |
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| End bp | 2133875 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637652203 |
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| Product | methylthioribulose-1-phosphate dehydratase |
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| Protein accession | YP_234940 |
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| Protein GI | 66045099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.123422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.880882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCG AACAATTGAG CCTGGAAATC ATTGAGGCCG GGCGTTTTCT GTACGGCCGT
GGCTGGTCGC CTGCCACCAG CAGCAATTAT TCTGCGCGCC TTTCTGCCAG TGAGGCGTTG
TTGACCGTAT CCGGCAAGCA CAAGGGCCAG TTGGGCCCTG ACGATGTGCT GGCCACCGAT
CTGGCTGGCA ACAGCCTGGA GCCCGGTAAA AAGCCGTCTG CCGAAACCTT GCTGCATACC
CAGTTGTACA GCTGCAGGCC GCAAGTCGGC GCGGTGCTGC ACACCCATTC GGTGAACGCG
ACCGTGTTGT CGAGGCTGAC CACGGCCGAT CATCTGGTGT TCGAGGATTA CGAACTGCAG
AAGGCCTTTA GCGGCGTGGT CACTCACGAG TCGCAGGTCG TGGTACCGAT TTTCGACAAC
GATCAGGACA TTGCCCGTCT CGCGGCAAAG GTGCAGCCTT GGCTGGACAC CCATCCCGAG
TGCGCCGGCT ACCTGATCCG CGGTCATGGC CTCTACACCT GGGGGGCTAA AATGAGCGAC
GCCTTGCGCC AGATCGAAGC GTTCGAGTTC CTGTTCGAAT GCGAACTGAA AATGCGCGCG
GTAATGAACC GCTGA
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| Protein sequence | MSREQLSLEI IEAGRFLYGR GWSPATSSNY SARLSASEAL LTVSGKHKGQ LGPDDVLATD
LAGNSLEPGK KPSAETLLHT QLYSCRPQVG AVLHTHSVNA TVLSRLTTAD HLVFEDYELQ
KAFSGVVTHE SQVVVPIFDN DQDIARLAAK VQPWLDTHPE CAGYLIRGHG LYTWGAKMSD
ALRQIEAFEF LFECELKMRA VMNR
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