Gene Psyr_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1813 
Symbol 
ID3367321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2086535 
End bp2087374 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID637652161 
Producthypothetical protein 
Protein accessionYP_234898 
Protein GI66045057 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID[TIGR02964] xanthine dehydrogenase accessory protein XdhC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.278053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACT GGATCAGCGC CCTGGCCGAG CTGCAGGCCC GTGGAGAACC CGGCATTCTG 
GTGACGATCA TCGAGGAGCT GGGCTCCACG CCACGTAATG CCGGATCGAA AATGGTGGTC
TGCGCCGAGC ACATCCACGA CACCATCGGT GGCGGCCACC TGGAATACAA GGCCATGGAA
ATCGCCCGCG AGATGCTTGC CAGCGGCACC CGGCAGACGC GCCTGGAACG TTTCAACCTG
GGTGCAAGCC TGGGCCAGTG CTGCGGCGGC GTGAACGTGC TGTTGTTCGA ACCGATGGGC
GAGCCCGTCG CGCAGATCGC CGTATTCGGT GCCGGTCATG TCGGCCGCGC GCTGGTGCCG
TTGCTGGCCA GCCTGCCCTG CCGGGTACGC TGGATCGACA GCCGTGAGCA GGAATTCCCC
GAACAGATGC CCGAGGGCGT GACGAAGATC ATCAGTGACG AGCCGGTCGA CGAGGTCGCG
CAACTGCCGG TCGGCACCTA TTGCATCGTG ATGACCCACA ACCATCAGCT GGATCTGGAA
CTGACGGCCG CCATCCTCAC GCGCGGCGAC TTTGGTTACT TCGGGCTGAT CGGCTCGAAA
ACCAAACGGG TCAAGTTCGA ACATCGCTTG CGGGAACGCG GTTTCGACGC CAGTCTGCTG
CAACGCATGC GTTGCCCGAT GGGCCTGGCC GAAGTCAAAG GCAAACTGCC CATCGAGATC
GCGGTGTCCA TCGCCGCGGA AATAATCGCC ACTTACAATG TCAGCTTTGG CCAACACACC
GCCAATGCCG AACCTATCGC CAGACTGCTG CCTGTATCGC GCCGCAGTCG GTCGCAATGA
 
Protein sequence
MNNWISALAE LQARGEPGIL VTIIEELGST PRNAGSKMVV CAEHIHDTIG GGHLEYKAME 
IAREMLASGT RQTRLERFNL GASLGQCCGG VNVLLFEPMG EPVAQIAVFG AGHVGRALVP
LLASLPCRVR WIDSREQEFP EQMPEGVTKI ISDEPVDEVA QLPVGTYCIV MTHNHQLDLE
LTAAILTRGD FGYFGLIGSK TKRVKFEHRL RERGFDASLL QRMRCPMGLA EVKGKLPIEI
AVSIAAEIIA TYNVSFGQHT ANAEPIARLL PVSRRSRSQ