Gene Psyr_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1797 
Symbol 
ID3367305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2069244 
End bp2070371 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID637652145 
Producthypothetical protein 
Protein accessionYP_234882 
Protein GI66045041 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0455083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.219568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC GCGTATTGGT CATCGGTGGC TACGGTAACT TCGGCAGCCT CATCTGTAAT 
CATCTGGTGA TGATGCCGCA CATCGATCTG GTCATTTCCG GTCGTGACCC GCGCAAGCTG
GCGGAAAAGG TCGCCGCACT GCAAACGCTG GGGGGCAGGT TCTGCGAGAG CTGGTGCGTG
GACATCCTGC AGGACGGCGC GGGCACTGAG CTGGGTGAAT TGGGCATTGA TCTGCTTATT
CACACCGCGG GGCCTTTTCA GGGGCAGTCG TATGCCGTGG CCCGGCATTG CATCGAGGCG
GGCGTGAATT ATTGCGACCT GGCCGATTGC CGGGCGTTTG TCGCCGGTAT CGCTACCCTC
GATGCCCAGG CGCGTGAGGC AGGTGTCAGC GTGCTGAGCG GGTGCAGCTC GGTGCCGACG
CTTTCGGCGG CCATCATCGA TCAGCATCGG CAGCGTTTTC TGCGTATCGA TTCGATAGAG
CATGGCATCT CCTCGGCAGC GAAAATGCCC GGTCTGTCGA CTGTACGCGG CGTGCTGGCC
AATGCCGGAC GACCGATCAG GCAACTGCGC AACGGCAAGA TCCACGACGT TTACGGCTGG
ATGGGCCTGA CCCTACGCCG GATGCACGGC ATGGGCACGC GGCTGGTGGC CAATGTCGAC
GTCCCGGACC TGGATGTATT CGCGACACGC TACGCCGCGC AGAACCTGAG CTTCAAGGCC
GGTTCCGCGC TCAAGGCCGG CGGCATCGCG ACCTGGCTGC TGGCGCTGGC GATTCGCTGC
GGGCTGCTGC GCGATCCTGC GCCGTGGGCC GAGCGCCTGT ACCGTTGGGG CGCGCGCTTT
GAACACTGGG GTGATCGAAA GAGCGCGATG TACATCGATG TCGATGGCCT CGACCTCGGC
GGCCAGCCGT TGCACATGCG TGCGCAATTG ACTGCACTGA ACGACAAGGG GCCGGAGATT
CCCGGCAGTG CCGCCGTCGC GCTGAGCAGC AAAATGGCCG ATGGCTATCG TCCACAACCG
GGCGCTCGGG CCTGCGTCGG AGAAATCACC GTGGACGAGT ACCTGGCGGC AATCGATGAG
CCGGAAAACA TCCGGCTGGA TATTCATTTC AAGAACCATA ACGTCTGA
 
Protein sequence
MAFRVLVIGG YGNFGSLICN HLVMMPHIDL VISGRDPRKL AEKVAALQTL GGRFCESWCV 
DILQDGAGTE LGELGIDLLI HTAGPFQGQS YAVARHCIEA GVNYCDLADC RAFVAGIATL
DAQAREAGVS VLSGCSSVPT LSAAIIDQHR QRFLRIDSIE HGISSAAKMP GLSTVRGVLA
NAGRPIRQLR NGKIHDVYGW MGLTLRRMHG MGTRLVANVD VPDLDVFATR YAAQNLSFKA
GSALKAGGIA TWLLALAIRC GLLRDPAPWA ERLYRWGARF EHWGDRKSAM YIDVDGLDLG
GQPLHMRAQL TALNDKGPEI PGSAAVALSS KMADGYRPQP GARACVGEIT VDEYLAAIDE
PENIRLDIHF KNHNV