| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1772 |
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| Symbol | |
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| ID | 3367280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2017234 |
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| End bp | 2018391 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637652121 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_234858 |
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| Protein GI | 66045017 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.535648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAT CCAAGACCCC AGATACCGAA GCTCCGCGCA ACTCGCCGCC ACCGGCACCG
TTGACGTCCC CGGTGACCAG CAAGCCGCGC TCGACCCGCA AGCGTGTCGT GTCTTCCGTG
ATTTTCGGCG CCGTCGCCCT GGCCGGGGTG CTGGTGGTGC TGTACGCCTG GCAACTGCCC
CCGTTTGCCA GCCCGATCGA GAGCACCGAG AACGCGCAGG TCAAGGGCCA GACCACGCTG
ATCGGGCCGC AACTGAGCGG CTATGTCTAC GAGGTGCCGG TGCAGGACTT CCAGTTCGTC
AAGGCCGGTG ATTTGCTGGT GCGTCTGGAT GACCGTATCT ATCGTCAGCG CCTGGATCAG
GCCATTGCAC AACTGGCTGT GCAGAAGGCC TCGCTGGCCA ATAATCTGCA ACAACGGCGC
AGTGCCGAAG CCACCATCGG CCAGCGTCAG GCCGAACTGC AGAACAGCAT CGCCCAGAGC
CGCAAGAGCG CCGCCGATCT GCGGCGCAAT CAGGCGCTGG TGACCGACGG TTCGGTTTCG
AAAAGCGAGC TGGATGTCAC GCGTGCCGCC GATGCGCAGG CAAACGCCGC CGTTGCCGAA
GCCAGGGCAG TCTTGCAGAT CGCCCGTGAG GACCTGCAGA CCGTCATCGT CAACCGTGGC
TCACTGGAAG CCTCGGTCGC CAATGCGCAG GCGGCGATCG AGCTGGCGCG CATAGACCTG
GACAACACCC GTATCGTTGC CCCGCGGGAC GGGCAGTTGG GGCAGATTGG CGTGCGTCTG
GGGGCCTATG TCAATTCGGG CGCGCAATTG ATGGCGCTGG TGCCCGAGCA GCGCTGGATC
GTGGCGAACA TGAAAGAAAC CCAGATGGCC AACGTGCGCC TGGGCCAGCC GGTGAGCTTT
ACCGTCGATG CGCTCGATGG CCACGAGATG CATGGCCACG TACAAAGAAT TTCGCCCGCT
GCCGGCTCGG AATTCAGTCT GCTGCCCGCC GACAACGCCA CCGGCAACTT CGTGAAGATT
TCCCAGCGTA TCCCGGTACG CATCGTGGTC GATGCCGATC AGCCCATGCT TGAGCACCTG
CGGCCAGGGA TGTCGGTGGT CGTGAGCATC GACACCAGCG CGGACGGCGA TGTGCCGCCT
GATCCGGCGG TGCGCTGA
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| Protein sequence | MTESKTPDTE APRNSPPPAP LTSPVTSKPR STRKRVVSSV IFGAVALAGV LVVLYAWQLP
PFASPIESTE NAQVKGQTTL IGPQLSGYVY EVPVQDFQFV KAGDLLVRLD DRIYRQRLDQ
AIAQLAVQKA SLANNLQQRR SAEATIGQRQ AELQNSIAQS RKSAADLRRN QALVTDGSVS
KSELDVTRAA DAQANAAVAE ARAVLQIARE DLQTVIVNRG SLEASVANAQ AAIELARIDL
DNTRIVAPRD GQLGQIGVRL GAYVNSGAQL MALVPEQRWI VANMKETQMA NVRLGQPVSF
TVDALDGHEM HGHVQRISPA AGSEFSLLPA DNATGNFVKI SQRIPVRIVV DADQPMLEHL
RPGMSVVVSI DTSADGDVPP DPAVR
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