Gene Psyr_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1703 
Symbol 
ID3367208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1912821 
End bp1913873 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content53% 
IMG OID637652049 
ProductFatty acid desaturase 
Protein accessionYP_234789 
Protein GI66044948 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.394001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG TCCAACGATT TCACTGTACA AATGCACTAA AACTTGAACT GACGTGTCTT 
TATAAAAAGA ATAACTGGCG ATGGCTATTG GGTTGGTCGG GGGATGTTCT TGTCATTGCT
TCCGCTGTCG CACTTACCCA ATGGTCATTG TATGCTTACC CCCTCAGTGT GCTGATTATC
GGTTCACGGC AACGCGCCCT TGCCTCTCTC GTTCATGAAG CAGCCCATTT AACCCTGACC
CAAAGCCGCC GCCTCAGTTA TGCCATTGGC CACTACCTGA CCGGATTACC CATCTTTCAG
GATTACGAGG CTTATCGACA TTCGCATGTG CACATGCATC ACCATCATCT CGGTGACGCC
GACAAGGACC CGGACTATCG TTACTATATT GAATCCGGGC TGCAGGCGAC CGAAGATCGA
TTCGACTTCA TGTTCAACCA CCTGCTTAGA ACCGTGCTGT TTCTGAATAT ATTCAGCTAC
CTGCGCTACC TCGTCATTCA TCGGTTGGGC GCACTGTTGA AATCCCCTCG CAAAGCCCTG
ACACTGATCG CGGTACACGC TGTTTTATTC TCGCTTTTCT ATGCCACCAC GGGCGTGTAC
GGTTACTTGA TGTTCTGGCT CGTTCCTTAT CTGACGGCCT TTCAGGTCAT CGGCTGGCTG
TCGGAAGTTT CTGAACATTT TGGATTATTC GGCAGGGAGC AGGAGGCCTT GCGTATCACC
CGCAACCGTT TTCCCTCCTG GTGGGAGAGG CTGTTTATCG GCATGCACGG GGACAACCTG
CACCTGACCC ATCACCTGTT CGCAGGCATC CCCTACTGGA ACCTGCACAA GGCACACTCC
ATTCTCCTGC AAGACCCTGA CTATGCCGAA GCCAATCTGG CCAAGGGTGG CATCATCTCG
GGTCGTCGCG ATACGCAATC GGTCATGCGC CAGATACTGA GTATTTATCG CCTGCAAAAC
AGACGTCATT CGCCATACGG CACTGCACCG CAGACACTGT GCGAACAGTC GGCACGAGAA
GGTACGCAGA CCACGAATGG CGATGACCGA TAG
 
Protein sequence
MQTVQRFHCT NALKLELTCL YKKNNWRWLL GWSGDVLVIA SAVALTQWSL YAYPLSVLII 
GSRQRALASL VHEAAHLTLT QSRRLSYAIG HYLTGLPIFQ DYEAYRHSHV HMHHHHLGDA
DKDPDYRYYI ESGLQATEDR FDFMFNHLLR TVLFLNIFSY LRYLVIHRLG ALLKSPRKAL
TLIAVHAVLF SLFYATTGVY GYLMFWLVPY LTAFQVIGWL SEVSEHFGLF GREQEALRIT
RNRFPSWWER LFIGMHGDNL HLTHHLFAGI PYWNLHKAHS ILLQDPDYAE ANLAKGGIIS
GRRDTQSVMR QILSIYRLQN RRHSPYGTAP QTLCEQSARE GTQTTNGDDR