Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1703 |
Symbol | |
ID | 3367208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1912821 |
End bp | 1913873 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637652049 |
Product | Fatty acid desaturase |
Protein accession | YP_234789 |
Protein GI | 66044948 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0177181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.394001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACCG TCCAACGATT TCACTGTACA AATGCACTAA AACTTGAACT GACGTGTCTT TATAAAAAGA ATAACTGGCG ATGGCTATTG GGTTGGTCGG GGGATGTTCT TGTCATTGCT TCCGCTGTCG CACTTACCCA ATGGTCATTG TATGCTTACC CCCTCAGTGT GCTGATTATC GGTTCACGGC AACGCGCCCT TGCCTCTCTC GTTCATGAAG CAGCCCATTT AACCCTGACC CAAAGCCGCC GCCTCAGTTA TGCCATTGGC CACTACCTGA CCGGATTACC CATCTTTCAG GATTACGAGG CTTATCGACA TTCGCATGTG CACATGCATC ACCATCATCT CGGTGACGCC GACAAGGACC CGGACTATCG TTACTATATT GAATCCGGGC TGCAGGCGAC CGAAGATCGA TTCGACTTCA TGTTCAACCA CCTGCTTAGA ACCGTGCTGT TTCTGAATAT ATTCAGCTAC CTGCGCTACC TCGTCATTCA TCGGTTGGGC GCACTGTTGA AATCCCCTCG CAAAGCCCTG ACACTGATCG CGGTACACGC TGTTTTATTC TCGCTTTTCT ATGCCACCAC GGGCGTGTAC GGTTACTTGA TGTTCTGGCT CGTTCCTTAT CTGACGGCCT TTCAGGTCAT CGGCTGGCTG TCGGAAGTTT CTGAACATTT TGGATTATTC GGCAGGGAGC AGGAGGCCTT GCGTATCACC CGCAACCGTT TTCCCTCCTG GTGGGAGAGG CTGTTTATCG GCATGCACGG GGACAACCTG CACCTGACCC ATCACCTGTT CGCAGGCATC CCCTACTGGA ACCTGCACAA GGCACACTCC ATTCTCCTGC AAGACCCTGA CTATGCCGAA GCCAATCTGG CCAAGGGTGG CATCATCTCG GGTCGTCGCG ATACGCAATC GGTCATGCGC CAGATACTGA GTATTTATCG CCTGCAAAAC AGACGTCATT CGCCATACGG CACTGCACCG CAGACACTGT GCGAACAGTC GGCACGAGAA GGTACGCAGA CCACGAATGG CGATGACCGA TAG
|
Protein sequence | MQTVQRFHCT NALKLELTCL YKKNNWRWLL GWSGDVLVIA SAVALTQWSL YAYPLSVLII GSRQRALASL VHEAAHLTLT QSRRLSYAIG HYLTGLPIFQ DYEAYRHSHV HMHHHHLGDA DKDPDYRYYI ESGLQATEDR FDFMFNHLLR TVLFLNIFSY LRYLVIHRLG ALLKSPRKAL TLIAVHAVLF SLFYATTGVY GYLMFWLVPY LTAFQVIGWL SEVSEHFGLF GREQEALRIT RNRFPSWWER LFIGMHGDNL HLTHHLFAGI PYWNLHKAHS ILLQDPDYAE ANLAKGGIIS GRRDTQSVMR QILSIYRLQN RRHSPYGTAP QTLCEQSARE GTQTTNGDDR
|
| |