| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1656 |
|---|
| Symbol | |
|---|
| ID | 3367158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1860127 |
|---|
| End bp | 1860780 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637651999 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_234742 |
|---|
| Protein GI | 66044901 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.268665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.199053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTTT CCAACGGTTT TCTGCTGAGT CTGTCCTTGT GTCTGGACAT TGGTCTGGCC
AACATCGCCA TGATCACGCT GTCCATGCAG CGCGGTTTTT CCAGGGGGCT ATGGCTGGGG
CTGGGAACCT GCGTCGGTGA TCTGGCCTAC GCAATCCTGG CGATGCTCGG CATGGCCGTG
CTGCTGCAAT ATGAAGCCGT GCGCTACGTG CTGTGGATTG GCGGCACAGC AGTGCTGGCC
TGGTTCTGCT TCAGGATGAT CATCAGTGCC ACTACCGTCA GCACCGGTCT CGACAGTCAG
AAGGTTGAAT CGGAAAAATC CAGCCTGGCG CTGTTCCTGC GCGGGATCTT TCTGGCGATG
TCCTCGCCCA GCGCCATCCT CTGGTTCGCC GCAGTCGGCG GGGCGCTGAT TGCCCGGCAA
GGCTCTGATC TTGTCAGCGC TTCGACCTTT CTCGCCGGGT TCGTCGCTGC GGGCGTGGTC
TGGTCGACCT CGCTGTGTGC GCTGGCTCAT CAGGGTGGGC GATTCATGGG CGAACGAATG
TTGCGCTGGT CATACATTGC CTCGGCGCTG ATCTTTGCCT ACTTCACGTT GTATGTGGTG
ATCACGGGTT ATCTGGAGTT TGTCGTTGCC TCTCCAGCGT TGCCGGCGCA CTAG
|
|---|
| Protein sequence | MEFSNGFLLS LSLCLDIGLA NIAMITLSMQ RGFSRGLWLG LGTCVGDLAY AILAMLGMAV
LLQYEAVRYV LWIGGTAVLA WFCFRMIISA TTVSTGLDSQ KVESEKSSLA LFLRGIFLAM
SSPSAILWFA AVGGALIARQ GSDLVSASTF LAGFVAAGVV WSTSLCALAH QGGRFMGERM
LRWSYIASAL IFAYFTLYVV ITGYLEFVVA SPALPAH
|
|---|
| |