Gene Psyr_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1596 
Symbol 
ID3367098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1795014 
End bp1795352 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content65% 
IMG OID637651939 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_234682 
Protein GI66044841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000735944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0306402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTC AAGTGATATC CCGTGACGGG GAGCCGGAAT ACGCCGTGCT GCCCTGGGCG 
CAGTATCAAG CACTGCTCAA GGCCGCCGGC CTGGCCGGCA AGCCTTCCGA GCCGGCTGCC
TCGACTGGCG GCACCACCGC CAGTGAGCTT CCCGGGTTCG ATGAATTGCG TGCACTGCGC
GAGGCCAAAG GCCTTGAAGC GGCAAGTCTG GCGCGTACCG TCGGGATCAG CCCGTCCTAT
CTGGAACTGA TCGAGAACGG TACTCGGCAG CCGGACGGCG CCATCAAACG CAGCCTGGCG
TGGGAGCTTG GAGTGCCGGG CTGGCGAGGT GAGTCGTGA
 
Protein sequence
MDLQVISRDG EPEYAVLPWA QYQALLKAAG LAGKPSEPAA STGGTTASEL PGFDELRALR 
EAKGLEAASL ARTVGISPSY LELIENGTRQ PDGAIKRSLA WELGVPGWRG ES