Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1596 |
Symbol | |
ID | 3367098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1795014 |
End bp | 1795352 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637651939 |
Product | helix-hairpin-helix DNA-binding motif-containing protein |
Protein accession | YP_234682 |
Protein GI | 66044841 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000735944 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0306402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTTC AAGTGATATC CCGTGACGGG GAGCCGGAAT ACGCCGTGCT GCCCTGGGCG CAGTATCAAG CACTGCTCAA GGCCGCCGGC CTGGCCGGCA AGCCTTCCGA GCCGGCTGCC TCGACTGGCG GCACCACCGC CAGTGAGCTT CCCGGGTTCG ATGAATTGCG TGCACTGCGC GAGGCCAAAG GCCTTGAAGC GGCAAGTCTG GCGCGTACCG TCGGGATCAG CCCGTCCTAT CTGGAACTGA TCGAGAACGG TACTCGGCAG CCGGACGGCG CCATCAAACG CAGCCTGGCG TGGGAGCTTG GAGTGCCGGG CTGGCGAGGT GAGTCGTGA
|
Protein sequence | MDLQVISRDG EPEYAVLPWA QYQALLKAAG LAGKPSEPAA STGGTTASEL PGFDELRALR EAKGLEAASL ARTVGISPSY LELIENGTRQ PDGAIKRSLA WELGVPGWRG ES
|
| |