Gene Psyr_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1545 
Symbol 
ID3367044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1738835 
End bp1739905 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID637651886 
Producthypothetical protein 
Protein accessionYP_234632 
Protein GI66044791 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0842476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0322858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATG TGCTTCGCAA TTGGGTGCAA CGCTACTTCT CTGACGAGGA GGCGGTGGTC 
CTGGCGGTTT TGCTGTTTCT GGCGTTCACC CTTGTCCTGA CGCTGGGCGG CATGCTGGCG
CCGGTCCTCG CCGGTCTGGT GCTGGCGTTT TTGATGCACG GGCTGGTCAG TGCCCTGGAG
CGCCTGCGCA TGCCCGAAAT GGCCGCCGTC GGTCTGGTGT TCACCCTGTT CATCGGCGTA
TTGCTGGTGT TCCTGCTGGT ATTGGTGCCA CTGCTCTGGC ACCAGTTAAT CACTTTGTTC
AACGAAGCCC CGGGTATGCT CGCCAAATGG CAATCCGTGC TGCTATTGCT GCCCGAGCGT
TATCCGCACT TGGTGTCCGA CGAGCAGGTG CTGCTGGCCA TCGAGGTCGC CCGGGGTGAA
GTGGGCAAGA TCGGTCAACT GGCGCTGACG TTCTCGATCT CCAGCCTGCC GCTGCTGGTC
AACCTGATGA TCTATCTGGT GCTGGTGCCG ATTCTGGTGT TCTTCTTCCT CAAGGATCGG
CACATGATCG GCCGCTGGGC GCGTGGCTAT CTGCCCCGTG AGCGCGCTTT GATCAACCGG
GTGGCGGATG AGATGAAGCG CCAGATTGCC AACTATATTC GTGGCAAGGT CATCGAGATT
TTTATCTGTG GTGGCGTGAC CTACATTGCT TTCGCCGCGC TCGGGCTCAA TTACGCAGCG
TTGCTGGCAA TGCTGGTCGG CATATCGGTG GTCGTGCCCT ATGTCGGCGC GGTAGTGGTC
ACCGTGCCGG TGGCGTTGAT CGGTCTGTTC CAGTGGGGCT GGGGTGACCA GTTCATCTAC
CTGATGATCG CTCACGGCAT CATTCAGGCA CTGGATGGCA ACGTGCTGGT GCCGCTGCTG
TTTTCCGAGG CCGTCAATCT GCACCCGGTG GCAATCATCT GCGCCGTGCT GCTGTTCGGC
GGGTTGTGGG GGTTCTGGGG GATCTTCTTT GCGATTCCGC TGGCCACGCT GTTCAAGGCC
GTGCTCGACG CCTGGCCGCG CAATGAGCCG ACGGTAGCCC CGTTGCTTTG A
 
Protein sequence
MFNVLRNWVQ RYFSDEEAVV LAVLLFLAFT LVLTLGGMLA PVLAGLVLAF LMHGLVSALE 
RLRMPEMAAV GLVFTLFIGV LLVFLLVLVP LLWHQLITLF NEAPGMLAKW QSVLLLLPER
YPHLVSDEQV LLAIEVARGE VGKIGQLALT FSISSLPLLV NLMIYLVLVP ILVFFFLKDR
HMIGRWARGY LPRERALINR VADEMKRQIA NYIRGKVIEI FICGGVTYIA FAALGLNYAA
LLAMLVGISV VVPYVGAVVV TVPVALIGLF QWGWGDQFIY LMIAHGIIQA LDGNVLVPLL
FSEAVNLHPV AIICAVLLFG GLWGFWGIFF AIPLATLFKA VLDAWPRNEP TVAPLL