| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1516 |
|---|
| Symbol | |
|---|
| ID | 3367015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1702313 |
|---|
| End bp | 1703671 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651858 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234604 |
|---|
| Protein GI | 66044763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.314645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.315596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACC TGTTCTCTCT GATACGAAAG CGCGCTACTC GCCCCCCAAC GCCCAGCGAT
GGCAAAGTTC AGATTCTGAC TTATCACGGA CGATCTTTCG TTACAGGCCT GCTGTGGCAC
CCGTTGGGTA GCCTTACCGG CTACATGAAG GAAGCACGCC AGTTTGGTCG CACCCAGCAA
ATGGACATCG TGGCCATCAG GCATACCGAG TCGGTGATTC AGGCTGGATT TGTTTCGCAG
AATGACGGTG CAGTCAAAGG TATGTATTCC CTTGCAGCTG CACTCGCCGG GCAGCTGGGC
GCATCGTGGC TGGCTGCCTG GAAGATCGAG GACGCCGAGG ATAGATACGC CTTGGTCGCA
GTGTACCGAG GTGCGGTCAT ACCCGGTGCA GACCTGGTAG GCAGCAGTGA GGAAATAAAA
AAGAAGGTGG CTCAGCAACT GAGCCGCTCG ATGAGCTTCG ACAAGATTTT TCTCCCCCCG
GAGTTTGGTC GCGGTGGCGA ACAATTCGAC CCTGAAGCAT TGTTGCAGCC ATCAAATCTC
AAGCGCGAAT ACAAACTGAC ACCGCTGGCA TTCGGCCTGT CCAGACAGGA ACTGCTGAAA
GCCGGGGTGA TTGGTGCCTT GGTCGTGGCC GGCCTGATTG GGTGGCACCA GTGGAATGAA
CATAAGCTGC AACTTGCTCG TCAGGCGCAG CAAGCGGCAG AAGCTGCAAG GCAAGCCGAA
TTGGATGCCC TGAACCAGCG AACAAACTCC CCAGTTGTGA TCGAGGCGCT TGTACATCCG
TGGGTAAAAC AGCCTTCTGT CCCAGTATTT CTTAGAGGCT GTAACGGCGC AATTGACCAG
TTACCACCGG CAATCCAAGG ATGGCTATTC GTCTCAGCTA AATGCGACGG AACGCTGATG
TCAGCCAACT ACAACCGGAC CGGCAACAGC ACCACGCTCG CTTTCAGCGC CGCTACGGCG
GGCTACTTTG CAGATACGCC CGCGTTCTAC GACGAAGGCA ACATGGCCGC GGTGAAGCTC
ACCTTCGAGC TGCCGCTGGC GGGTGATGAC GTTCTGAACC CGGCAACGCA GGCCTTGGAC
AGCATCACTT CATGGCTGCA AGCCCAGAAC GTCCAGCCCA AGATCACGGA AGTACCTGTG
ACGGTTGTCC AGCCACCAGC TTTGCCTGGC CAGCCAGCCC CTCCACCACC ACCGCCTCCG
GATTATCGAC ACTTCGAGAT CCGCTACACG AGCCTGTTAC CGCCAGCGAC TGTTCTTCAA
GGCGTGGAAA GCACGGGCAT GCGCCTGCGT GAAATCAAAA CCGACTTTCA AGACGGCAAA
TTAACCTGGA ACGTCATAGG TGACCTCTAT GTGCATTAA
|
|---|
| Protein sequence | MANLFSLIRK RATRPPTPSD GKVQILTYHG RSFVTGLLWH PLGSLTGYMK EARQFGRTQQ
MDIVAIRHTE SVIQAGFVSQ NDGAVKGMYS LAAALAGQLG ASWLAAWKIE DAEDRYALVA
VYRGAVIPGA DLVGSSEEIK KKVAQQLSRS MSFDKIFLPP EFGRGGEQFD PEALLQPSNL
KREYKLTPLA FGLSRQELLK AGVIGALVVA GLIGWHQWNE HKLQLARQAQ QAAEAARQAE
LDALNQRTNS PVVIEALVHP WVKQPSVPVF LRGCNGAIDQ LPPAIQGWLF VSAKCDGTLM
SANYNRTGNS TTLAFSAATA GYFADTPAFY DEGNMAAVKL TFELPLAGDD VLNPATQALD
SITSWLQAQN VQPKITEVPV TVVQPPALPG QPAPPPPPPP DYRHFEIRYT SLLPPATVLQ
GVESTGMRLR EIKTDFQDGK LTWNVIGDLY VH
|
|---|
| |