Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1457 |
Symbol | |
ID | 3366956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1644169 |
End bp | 1644915 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651799 |
Product | hypothetical protein |
Protein accession | YP_234545 |
Protein GI | 66044704 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.914801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTTT ACAACCTGCG AATGTTCACA ATGACGGGAG TCATCCTGAT CACAGCAGCT GGCATGGCCA ACGCTGCAAC CAACACCTCC GCACAGTCCA CCAGTAGAGA GCACCAGAGC GCTTTGCTGG ACAGCCAGTC GCAATCGAGC GACGAGATGC TGGCACGAGA CTGGAACCTG AGTCCTCAGG AATGGCAGCG CTATCAAACG CTGATGCAGA GTTCACGAGG TGTGTATTCC CCCGGGCTGG ATCCGCTGAC TGCATTGGGT ATCGAAGCCC GCAATGATGA AGAGCGCCGG CGGTATGCAG AGCTCCAGGT CAAAGCCGAG GCGCAGCGCA CGGCAAAAGA ATTGGCGTAT CAACGCGCAT ATGACGATGC CTTTAAACGC CTCTATCCCA ATCTGATGCC CATCGCCAGT TCGGCGCCCC AAGGGGCGAC CGCAAGCCCT GCTAACCAGG GCAATGGCCG ATTGGCAGTG TTCGTCAAGG ACGATTGCCC GGAGTGCTCA GTTCGGGTTA AGGCCCTTCA AGCTCAGAAG CAGCCGTTTG ACGTGTACAT GGTGGGTAGC CAGAACGACG ATGAGCGAAT TCGCAACTGG GCGATTGTCT CGGGGATCGA CCCTGCGAAT GTCAGAACCC GACAAATCAC CCTCAACCAT GACGGTGGAC GTTGGCTTGG CCTGAGCTTG GGTGGCGAGT TACCGGCCGT TGTGCGAGAG GTGAATGGGC AATGGCTGCG TCAGTGA
|
Protein sequence | MTVYNLRMFT MTGVILITAA GMANAATNTS AQSTSREHQS ALLDSQSQSS DEMLARDWNL SPQEWQRYQT LMQSSRGVYS PGLDPLTALG IEARNDEERR RYAELQVKAE AQRTAKELAY QRAYDDAFKR LYPNLMPIAS SAPQGATASP ANQGNGRLAV FVKDDCPECS VRVKALQAQK QPFDVYMVGS QNDDERIRNW AIVSGIDPAN VRTRQITLNH DGGRWLGLSL GGELPAVVRE VNGQWLRQ
|
| |