Gene Psyr_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1414 
Symbol 
ID3366911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1598996 
End bp1600066 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content54% 
IMG OID637651755 
ProductTonB, C-terminal 
Protein accessionYP_234503 
Protein GI66044662 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.170707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA TTCGAGAGCC GTCCGCCTCG GAAAGCTACT TCTGGCCCAG TGTCTGGGCC 
GTGGCATTGC ATATTCTGAT TTTCGGCATG CTGTTCGTCA GCTTTGCCAT GACTCCGGAT
CTGCCCGAAG CCAAGCCTAT CGTTCAGGCA ACGCTCTATC AGCTCAAGTC CAAGAGCCAG
GCCACTACCC AGACCAACCA GAAGATTGCC GGTGAGGCGA AGAAAACCGC TGCGCGACAA
ACAGAAGTCG AACAGCTGGA GCAGAAAAAG ATCGAGCAGC AAAAACAGGA AGCTGTAAAA
GCTGCGGAAC AAAAGAAAGA AGAGTCTGCT CAAAAAGCCG AAGAGCAGAA AGCAGCCGAC
GAAGCCAAAA AGGCCGAACA GAAAGCAGAA GAGGCCAAAA AGGCTGACGA TGCCAAGAAA
GCCGATGAAG CCAAGAAGGT TGCCGACGCC AAAAAGCTTG AAGAGAAGCA GCTGGCTGAT
ATAGCCAAGA AGAAGGCCGA AGACGAGGCG AAGAAAAAAG CCGAAGAAGA CGCCAAGAAA
GCTGCTGCCG AGGAAGCCAA GAAACAGGCT GCTGATGAGG CCAAGAAAAA GGCCGCAGAA
GACGCCAAGA AAAAGGCTGC CGAGGACGCG AAGAAAAAAG CCGCTGCCGA TTCCGCCAAG
AAGGCGCAGG AAGCAGCCCG TAAATCCGCT GAAGACAAGA AGGCGCAGGC ACTGGCCGAT
TTGCTGTCCG ATAAACCGGA GCGGCAACAG GCTTTGGCTG ACGAGCGGGG CGATGAAACG
GCTGGCAGTT TCGATGACCT GATTCGTGTA AGGGCTTCGG AAGGCTGGAG TCGTCCACCA
TCGGCACGTA ACAACATGTC GGTAACGTTG CAGATCGGGA TGTTGCCGGA CGGTACGATT
GCTTCTGTAT CGATTGCCAA ATCCAGTGGT GACGGACCGT TTGACAGCTC TGCGGTTGCT
GCGGTGAAGA ACATTGGACG TTTGACAGAA ATGCAGGGTC TGAAGCCGGC TGACTTCGCG
CCCTATCGTT CATTCAAGAT GACATTCACA CCTGGAGATC TAGCCTTGTG A
 
Protein sequence
MQPIREPSAS ESYFWPSVWA VALHILIFGM LFVSFAMTPD LPEAKPIVQA TLYQLKSKSQ 
ATTQTNQKIA GEAKKTAARQ TEVEQLEQKK IEQQKQEAVK AAEQKKEESA QKAEEQKAAD
EAKKAEQKAE EAKKADDAKK ADEAKKVADA KKLEEKQLAD IAKKKAEDEA KKKAEEDAKK
AAAEEAKKQA ADEAKKKAAE DAKKKAAEDA KKKAAADSAK KAQEAARKSA EDKKAQALAD
LLSDKPERQQ ALADERGDET AGSFDDLIRV RASEGWSRPP SARNNMSVTL QIGMLPDGTI
ASVSIAKSSG DGPFDSSAVA AVKNIGRLTE MQGLKPADFA PYRSFKMTFT PGDLAL