Gene Psyr_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1306 
Symbol 
ID3366801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1481894 
End bp1482583 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID637651645 
ProductCheW-like protein 
Protein accessionYP_234395 
Protein GI66044554 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00397528 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGGCG TGTCCGGTTT TTCCAGTCTG ACCCATGATC AGGCCCTGGA TATCGATGAT 
TGCTGGAACC GCATCGGCAT TCATGGCGAT CGCTCCTGTC CGTTGCTTGC AGAGCACATC
CACTGCCGCA ACTGCGCGGT TTATTCGGCC GCAGCCACCC GTCTGCTGGA CCGCTATTCG
CTGGCCCAGG AGTCGCCCGA GCATTTTCAG GGCTCGGTGT TGCTGCGCGA CCTCGAGACC
CGCTCGATTC TGGTATTTCG TCTTGGCGAA GAGTGGCTGG GGCTGGCGTC GCGCTGCCTC
TCGGAAGTCG CCCCCAGCCA GACCATCCAT TCACTGCCAC ACCAGCGCTC GCGTGCGTTG
CTGGGTGTCG CCAATGTACG CGGCGCTCTG GTAGCGTGCA TCTCGCTGGT CGAGCTGCTC
GGGTTGGACA GTACCGCGGT GAGTAACCCG TCGACGCGGG TGGTACCGCG CATGCTGATC
GTCAGCGTCG AAGGCGGCCC GGTGGTGGTC CCGGTGGACG AGGTGGACGG CATTCATGCC
ATCGACGAGC GGGAGCTGGA AGCCGCTTCG GCGTCCGGCA CGCACGCCAA TGCCCGTTTC
ACCCGTGGCG TCCTGCAATG GAAGGGCCGC AGCCTGCGCT GGCTGGATGA AGATGAGTTG
TTGTCGGCGG TGTATCGGAG CCTCACATGA
 
Protein sequence
MAGVSGFSSL THDQALDIDD CWNRIGIHGD RSCPLLAEHI HCRNCAVYSA AATRLLDRYS 
LAQESPEHFQ GSVLLRDLET RSILVFRLGE EWLGLASRCL SEVAPSQTIH SLPHQRSRAL
LGVANVRGAL VACISLVELL GLDSTAVSNP STRVVPRMLI VSVEGGPVVV PVDEVDGIHA
IDERELEAAS ASGTHANARF TRGVLQWKGR SLRWLDEDEL LSAVYRSLT