| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1302 |
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| Symbol | |
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| ID | 3366797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1472181 |
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| End bp | 1478153 |
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| Gene Length | 5973 bp |
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| Protein Length | 1990 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651641 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_234391 |
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| Protein GI | 66044550 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0407416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATC TATCTCCGTC GGGCAAGGCT CCTGAGCTCC CGCATCTGCA ACTGATAAAA
GACAAATCCC CCGAGTGGCT GCTTCAGGCA ACGCCGGCAA CCCATGCAAC CTTGCGCAAA
GCCTCGCGAC GCCCGTTGCA ATGGCTGGCA GGCGCCCGCA AGTCCAGCCC TGATCAGCTC
GCCGAGCTGC AGCGCCTGTA TGCCGGGCAC CGCGAGTACG AGCAACAGGT TCGTCCGACG
CTGGACGGTC TGTCGACGCT GGAGGACTTC GCAAGGCCCC TGCTGACAGC CGCCATCAAG
GATCGCTTCG GGCTGGAGGT GGACGTCGCC AACACCTGGC TGTTCCATGC CAGTCGTGCA
CGGGTCGACC AGTCGTTCAA TACGGCATCC AGAGACCCGG TAACGCAGGC AAACACTGCC
CTGAGGGCGT CGACCCAGAG CCTCCTCAAG GCTGCGCTGC AGAATTTCGA AGCCTGGGAA
ACCACACCGG GCGCAATGGA CGCCAGCACC GGCATCAAGG CCCAGGTGTT TTCTTCCTTT
GAAATCATCG GCCAACAGAT CACCGGCACG TCCCTGCCGA TTTCCCCGAC CGGCTTTGCG
GCGCTGTGCC GTGAGCTGGA CCTGGGCGGC CAATATCAGG CGCATATCCA GGCCGTCTTC
AGCACGCCTT CGAGCCCCGA CGAAACTGCA GACGCCGCGG CATCCAGACT GCGCCAGAGC
TTCATGCAAC TGGAAGCATC GTCGATCCGG CTGCAGTTGC AGATGGCCTC CCTGCAACAG
CAGATCGGCC CGGATTTGCA AGGCGCATTA CTTGAGCTTC TCGACGGCAA GCAACATGTC
CGACTTGATA ACAGGCCGGT CAACTGCAGC GTACTGTGCC TGGGCGATAT CGAACTGAAC
GGTCTTCTGG TGATTGGCAA AGACCGGGAT ATTGCCACTC AGGCAGAAAG GATTGTGGTG
TATATCCCGG ATGACCCCGT TGCGCCGCTG AAGGAATACG ACTCGGTCGA AGTCTTCATA
AATGCGTTGC GTGAGCGGAT GTTCATCAAC GGCTACCTGA ACTTCTTCAT GCGTTTCGTA
CCTGCACGCC ATCGAAGTAC CGTATTTGAA AAGTTGTCCG AACGCCTGTA CCCCAAAGTC
AAGAAAGGCG GCATTTTCGA ACGTCAGTGG CTGGAGCGTG AAGCGGACCG AAACGCGCGA
CTCGACCTGA GAGAAACCGT GCTGCAAGGC CCGCTGCTGG ACAACCTGCA TGAGCGCAAA
TGCGCGGCGT TGCGCGACGA CGCACTGTTT CATGGTGTGC CGACTGCGGC ACAGGACCAG
AAGACCTTCG ATGAGCGGGT GCAGTACTTC ATGGACACCG CCTTCGACGT CTTGAATATC
GCAGGCTTCG TGGTTCCGGT ATTGGGCGAA GTGATGATGG CCGTCACCGC CATTCAGCTG
GTTCACGAAG TGTATGAGGG CATGGAGAGC TGGGCCAGGG ACGAGAAACG ACAGGCGTTC
GCCTACCTGT TCGATATGAT CGAGAACGTT GCGCTGATAT CGGCCCTTGG TGCTGCGTCG
ACGGGCGCAG CGGGCATCCC TGCAGTACAG GCGCCCGAGT TCGTCCACCG CCTCAAGCCC
GTGGATTTAC CAGGCGGCAC GACGCGCCTG TGGAAGCCTG ATCTGACGCC CTTTGCCCAT
GACATCGTCC TGCCCAAGGG GCTGCAGCCC GATGCTACAG GGCTGTACAC ATGGCAGGGC
AAACAATGGC TGCCACTTGA AGGACGCACC TATTCGGTCA GCCCTGCCGC CAACGGCGAC
GGTTACCTGA TCGAGCATCC GACCCGTACG GACAGCTACC GGCCCGCCTT GCGGCACAAC
GGCGCCGGAG CATGGCTGCA TGAGCTCGAT CAGCCGCTGG AGATGGAAGG CCTGACCTTG
TTTCGACGGC TGGGCTATTC CAGCGATACG TTTTCCGACA GCACCGCCAG GCGCATCGTC
AACGTCAGCA ACACGCCTGA ATCGGTGATG CGCGAAGCAC TGACCGATCA GCGTCGCCCT
CCGGCATTGC TCGAGGACAC GGCGCACCGG TTCAGGCTGG ACCAGGAGAT CGAGCATTTC
ATCGAGCAGC TCGAAGCCAA CGATATAAAC GCAGCGTCCC CCCTTCAACT TGAACTGCTG
AGCCAGGACC GTGGCTGGCC GGGCAATCGC GCGCTGGTCT TGGTGGATGC CGAGGGCCAC
ACGCTTCAGA CATTCGCCCC GGCCTCTCAT CCGGTGGCGG CTGACAGCCT CGACATCACG
GTGCGTGCCG ACCAGCCGGA TGCCCTGCGC CAGGTGCTGG AAAAGCTCGG CAACAACGAA
ATACGAACCC TGCTCAACGA AGAGTTCGGC GCGGGTCAGC TCGGCATTTC ACCGCGACTG
ATCACACTAC GGGCGCAATT GGCGGCACGC GCCCGAGCCA CCCGAGGCTG GCTGTTCGAA
TCCCGTTACC GCGCATTGAG CGTCGCCGAG GCTGACGGCG TGCAGACCCT GCAGAAGGCA
TTTCCCGGCC TGCCACCGTT GGTTGCCGAG GAACTGGCCA GCCACGCCTT GCCGGCAGAG
CGGCTGCAAC TGACGACGGA GCGCCGCGTG CCGCTGCCCG TTGCCGAAGA GGCCAGCGCC
TATTTACAGC AGGTGAGACT GGCGCGGGCC TATGAAGGGC TTTATCTGAC CTCGGTCTCC
AGCGCCGATA CCGACTGTCT TGCGTTGCAC AGCCTTGAAG CCCTGCCGCA ATGGCCTGCA
CAGGTCAGGC TGGAGGTCCA TGACCGGTAT TTCGGTGGCC GCTTGATCGA CAGCATCGGT
CCCGAGGATG CGCCTGTGCG CAAAGTGTTG ATCAAGGACG GTAATCGTTA CGAGGCCCGT
GACGCTGATG ACCAGCACCT GCACGGGCTG GACGATCTGT ACTCGTCCGT GCTGCACGCC
CTGCCCGATG CCGAACGCAA CCAGTTGGGC TTTGCCCACA CCGGGCAGGG TCAGGCGCTG
GCAACGCTGA TCCAGGACAA CCCCCTGCCC CGCCAGCACC TCGCGCCATT GCTGAACATG
CAGGCGATCA AGCCAGGCAG CAGATCCCCC ATGCGCCTGG CTGACGGTCG CCTTGGCTAC
CCCCTGAGCG GTAGCGGCAG GGTCGACTGG CACATGACCG ACGAGAGCCT GCTGGACAAG
ATCCGCATGC TTGAGCTGGA GGACGCGTTT CCCGAAGAGA TCCTCGGCCG CCTGCGCCAC
ACTGGCTGGG ACAACAGAAC CATCGATGCG CGACTCAACG ACCTGCTGCA CGAGCAAATG
CTGTTGCGCG CAAGTCTCGA CGCCTGGGCC TATGAATCCG TGTCAATGCC GCCCATGACT
CAGGCTCATA TGGACAGTCG CGTGCGCATC AACGAAGCGA TCTGGAGCCA CTGGCGCCTC
AACAACCTGC CCGAGATAGG ACGGACGCTT GAGCCTCTAC GCCTGCAACA TGTCTCGCTG
AGTGACTTTC CGCACCATCT GCCGGACTTC GTCTTCAATC GCGTTACCGC GCTGCACCTG
GAAAACATAT CGGTCGAGCC CAGAGCACGC CCCGGTGCAA TTAACCTGAC GCCTGCCGGC
ATAAACCTGC CCCGGCAGTC GACCAACAGC GCCGAACTTG GAGCCTTCCT GCAACGTTTC
CCGCATACCC GCGCACTGAA CCTGATCAGT GAGCCAGCCG CCGGACTGGC CCCCGAGACC
TCGGTCTTTC TCAACCTGCC TCAGCAAGTG TCCCGTGTGC TGCCCCAACT GACCGAACTG
GCGCTGATCA ACCAGGAGAT TTTTCTGGAT CAGGCGCAGA TGGACCACCT GCGCAGCATG
CCGGGCCTCA GGATGCTGAA CCTCAGTGGC AATCGACTGG TCAGTGTGCT GCCCATGGAC
CTGAGCTGGC TGCACCTTGA TCGACTGGTG CTGGAGCGGG TTGGCATGAA CCGCTGGCCG
TCCTGGCTGA CCGACATCAT TCCGAACAAC ATTCGCGAGC TGTCGGTGGC TCACAACAAC
CTGACGGAAC TGCCCGGGTG GATCCTTGAC AATCCTCCCA GCCCTGAGCA CCGGACCTTG
ATTGACTTGC GCGGCAATAT CCTGTCCCGA CACACCGCAA TACACGCACG TATCAATGAA
GCGGTAGCCG GCAGTTCCTT CAGTTTTGTC ATGGACACTC CGGTTGCCGT GCAGGCCGCT
GTAAACAGGC AACTGAACGA AGGTGCCGAA TTATTTGCCG CCGTTGATCA ATGGACGCAT
GCCTCCGGCT CGATGGCCGT ACCGAGCGAG CAGACCATCG AATCACGCCA GCAGATCGGC
AGGGTACTGA TCGATCACTG GCGAAATTTC AGCCTGGGGC AGCTCCATAG CCCTTTGCGC
CTTGCAGACA TCGCATTGAT CGACTTTCCG CGACAGCTGC CTGATTTCTT TTATCGCCAG
GTACGCTATC TGCACCTGAG CCGAATCACC GGCACGGCCT CTGATCTGGA TCAACTGTTG
CGCCGCATGA CTGATCTGAC CTCACTGGAA ATAAGCGGAC ATGTCGCCCC CCTGCTGCAA
CTGCCACCGG CGCTGCTCGA GCTTCGATCA CTTCGTTCGC TATCGCTGAT GGATCAGGGA
ATGCTGGTAG AGCAACAGCA CATCGATTTC TTCAGCCGGA TTGCGACGCT TGAACGACTG
GAGCTGGATG GCAACCGGAT AGGCGCCATC AGCGACCTGA CCAGCCTCAG TGGCACTGCA
CTCAACTGGC TGTCACTGAA CAATGCCGGA CTGGTCGAAT GGCCAGCCTG GACAGAGAGC
ATGGTTCCAG CGCAAATCAG GACACTCTTG CTGGAGGGTA ATCTGATCAG CGAATTGCCA
GAGCACATAC TCGCCAATCC CGGCAGCGAG TTTGCGCACA CGGAAATAAG CCTGCTGAAC
AATCCGCTTT CCGAAGACAC CATGCGGCAG GCGCATTTTT CAGAGCGTTA TGGACGTTCT
TTCACCTTCG ACATGGACCT GCCGCCCGAG CTCAGCGCGA TGGACTGGAC GGAAAACCAT
GACTCGGACT CATCGTATTC CGAGTACCTG TCCTCAGAGG ACAGCCGGGC ATCGACTCCG
GAACCCGTCA CCGTCGAGCC CTGGCTGGAC GACAGCAACC CGTTGAGCGC CGGGCGGCGC
GAGATCTGGG AGCAGTTGGA GGCCCGCGAG CAGACCCGCA ACCTGCTCGA CCTGATCGAT
TCACTCCGTC ACAGCGCCGA TTATCGCAAC ATCACCAGCC GTGCAGCGCT GCGCGAGCGC
GTCTGGCGGG TATTGGTCAC GGTGAGTCAG GACCCGCAAC TCGGACTGAC CCTCAACGCT
ATTGCCGAAG AACCGCTCAG GCTGTTTCGT GACAACCACA CCTGCCCGGA CGGCATCCTT
CTGGAGTTCA ACCAGATGGA AGTGCTGGTG TTCATCCGGC AGTCGTTGCA GGACGTCGTC
GCGGAGCAGC GCGGTGCGCT GTTGTATCGG CTGACCGTCC GGCTGTATCG CCTGTCCGAG
CTGGATACCG CAGCCCGCGA ACAGACCGGC AGCCGTGATG AAGCCGAGGT ACGTCTGGCG
TATCGCACGC ACTGGGCCAG CGCGCTGGAC TTGCCCGTGC CGCCGGAAGG CATGCTGTAC
CAGGCCCACG CCGCCATCAG GCCGGGGGAA TTCGACGCGG CACTGCTTCG CGTGCAAAAC
GGCGAACGCG GCGAGCCCTT CCTGCGTTTT GCCCAGCAGC AGGATTACTG GATCAGTTAC
CTGCGCGAAA TCCATGCTGG ACGCTTCGAA GCACTCGAAC GCACCTACAG GACTGAACTG
AACCAACTCA CCGACGAGTT CGAGCAACGC AATATCAGCC TCGACGATCC GGAATACGAA
GGACGGATTC AAGAGTTCGA AGCCAGGTTC AAGGAGCAGC AGACAGCACT GATCAGGGAG
CTGACCAACG CCGAAGGAAT GGAACATCAC TGA
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| Protein sequence | MLDLSPSGKA PELPHLQLIK DKSPEWLLQA TPATHATLRK ASRRPLQWLA GARKSSPDQL
AELQRLYAGH REYEQQVRPT LDGLSTLEDF ARPLLTAAIK DRFGLEVDVA NTWLFHASRA
RVDQSFNTAS RDPVTQANTA LRASTQSLLK AALQNFEAWE TTPGAMDAST GIKAQVFSSF
EIIGQQITGT SLPISPTGFA ALCRELDLGG QYQAHIQAVF STPSSPDETA DAAASRLRQS
FMQLEASSIR LQLQMASLQQ QIGPDLQGAL LELLDGKQHV RLDNRPVNCS VLCLGDIELN
GLLVIGKDRD IATQAERIVV YIPDDPVAPL KEYDSVEVFI NALRERMFIN GYLNFFMRFV
PARHRSTVFE KLSERLYPKV KKGGIFERQW LEREADRNAR LDLRETVLQG PLLDNLHERK
CAALRDDALF HGVPTAAQDQ KTFDERVQYF MDTAFDVLNI AGFVVPVLGE VMMAVTAIQL
VHEVYEGMES WARDEKRQAF AYLFDMIENV ALISALGAAS TGAAGIPAVQ APEFVHRLKP
VDLPGGTTRL WKPDLTPFAH DIVLPKGLQP DATGLYTWQG KQWLPLEGRT YSVSPAANGD
GYLIEHPTRT DSYRPALRHN GAGAWLHELD QPLEMEGLTL FRRLGYSSDT FSDSTARRIV
NVSNTPESVM REALTDQRRP PALLEDTAHR FRLDQEIEHF IEQLEANDIN AASPLQLELL
SQDRGWPGNR ALVLVDAEGH TLQTFAPASH PVAADSLDIT VRADQPDALR QVLEKLGNNE
IRTLLNEEFG AGQLGISPRL ITLRAQLAAR ARATRGWLFE SRYRALSVAE ADGVQTLQKA
FPGLPPLVAE ELASHALPAE RLQLTTERRV PLPVAEEASA YLQQVRLARA YEGLYLTSVS
SADTDCLALH SLEALPQWPA QVRLEVHDRY FGGRLIDSIG PEDAPVRKVL IKDGNRYEAR
DADDQHLHGL DDLYSSVLHA LPDAERNQLG FAHTGQGQAL ATLIQDNPLP RQHLAPLLNM
QAIKPGSRSP MRLADGRLGY PLSGSGRVDW HMTDESLLDK IRMLELEDAF PEEILGRLRH
TGWDNRTIDA RLNDLLHEQM LLRASLDAWA YESVSMPPMT QAHMDSRVRI NEAIWSHWRL
NNLPEIGRTL EPLRLQHVSL SDFPHHLPDF VFNRVTALHL ENISVEPRAR PGAINLTPAG
INLPRQSTNS AELGAFLQRF PHTRALNLIS EPAAGLAPET SVFLNLPQQV SRVLPQLTEL
ALINQEIFLD QAQMDHLRSM PGLRMLNLSG NRLVSVLPMD LSWLHLDRLV LERVGMNRWP
SWLTDIIPNN IRELSVAHNN LTELPGWILD NPPSPEHRTL IDLRGNILSR HTAIHARINE
AVAGSSFSFV MDTPVAVQAA VNRQLNEGAE LFAAVDQWTH ASGSMAVPSE QTIESRQQIG
RVLIDHWRNF SLGQLHSPLR LADIALIDFP RQLPDFFYRQ VRYLHLSRIT GTASDLDQLL
RRMTDLTSLE ISGHVAPLLQ LPPALLELRS LRSLSLMDQG MLVEQQHIDF FSRIATLERL
ELDGNRIGAI SDLTSLSGTA LNWLSLNNAG LVEWPAWTES MVPAQIRTLL LEGNLISELP
EHILANPGSE FAHTEISLLN NPLSEDTMRQ AHFSERYGRS FTFDMDLPPE LSAMDWTENH
DSDSSYSEYL SSEDSRASTP EPVTVEPWLD DSNPLSAGRR EIWEQLEARE QTRNLLDLID
SLRHSADYRN ITSRAALRER VWRVLVTVSQ DPQLGLTLNA IAEEPLRLFR DNHTCPDGIL
LEFNQMEVLV FIRQSLQDVV AEQRGALLYR LTVRLYRLSE LDTAAREQTG SRDEAEVRLA
YRTHWASALD LPVPPEGMLY QAHAAIRPGE FDAALLRVQN GERGEPFLRF AQQQDYWISY
LREIHAGRFE ALERTYRTEL NQLTDEFEQR NISLDDPEYE GRIQEFEARF KEQQTALIRE
LTNAEGMEHH
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