| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1206 |
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| Symbol | HrcT |
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| ID | 3366700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1365209 |
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| End bp | 1366003 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651547 |
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| Product | type III secretion protein HrcT |
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| Protein accession | YP_234298 |
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| Protein GI | 66044457 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.479816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCG ACGCGCACAG CGCCTTTCAA TTCATGCTGG GCATGGGACT GGCAATGGCG
CGGCTGATGC CCTGCATGCT GCTGGTGCCA GCCTTTTGCT TCAAATACCT GAAAGGCCCG
TTGCGTTATG CCGTCGTGGC GGTGATGGCG ATGATCCCGG CACCGGCCAT CAGCAAGGCT
CTGGAGTCCC TCGACGACAA CTGGTTCGCA ATCGGCGGCC TGCTGATCAA GGAAGCGGTA
CTCGGCACGC TACTGGGGCT ATTGCTGTAT GCGCCATTCT GGATGTTCGC CTCGGTGGGC
GCGCTGCTCG ACAGCCAGCG CGGTGCGCTC AGCGGCGGCC AGTTGAACCC GGCGCTGGGC
CCTGACGCCA CGCCACTGGG CGAATTGTTT CAAGAAACCC TGATCATGCT GGTAATCCTC
ACCGGGGGGC TTTCGCTGAT GACTCAGATC ATCTGGGACA GCTACAGCGT CTGGCCTCCA
ACGGCCTGGA TGCCGGGCAT GAACGCTGGC GGCCTGGATG TCTTTCTGGA GCAGTTGAAC
CAGACGATGC AGCACATGCT GCTGTACGCG GCGCCCTTCA TTGCGCTGCT GCTGTTGATC
GAAGCGGCGT TCGCGATCAT TGGTCTGTAT GCGCAACAGC TGAACGTTTC GATCCTCGCC
ATGCCGGCCA AGAGTATGGC CGGCCTCGCT TTTCTGCTGA TCTATCTGCC GACGCTGCTG
GAACTGGGCA CCGGTCAATT GTTGAAGCTG GTTGATCTGA AGTCGCTACT GACGCTTCTG
GTGCAAGTGC CGTGA
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| Protein sequence | MPFDAHSAFQ FMLGMGLAMA RLMPCMLLVP AFCFKYLKGP LRYAVVAVMA MIPAPAISKA
LESLDDNWFA IGGLLIKEAV LGTLLGLLLY APFWMFASVG ALLDSQRGAL SGGQLNPALG
PDATPLGELF QETLIMLVIL TGGLSLMTQI IWDSYSVWPP TAWMPGMNAG GLDVFLEQLN
QTMQHMLLYA APFIALLLLI EAAFAIIGLY AQQLNVSILA MPAKSMAGLA FLLIYLPTLL
ELGTGQLLKL VDLKSLLTLL VQVP
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