Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1104 |
Symbol | |
ID | 3366598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1249700 |
End bp | 1250314 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651445 |
Product | Heme oxygenase |
Protein accession | YP_234196 |
Protein GI | 66044355 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3230] Heme oxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.039154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCTTG ATCAGAACCG ACCGACCCTG CGTTCGCAAC GCCTGAGCCA GATCACCCAC GCACCGCATG AACAGCTCGA CAAGGCGGTC AAGGCACATG CGCCGTTTGA CACCCTGGCC AGCTATTCGC GCTTCGTGGT TGCCCAGTAC CTGTTCCAGA AAGAGCTGCA ACCCCTGTAC AGCGACCCCA CGCTTCAAAC GATCATCAGT GACCTGCCGG CCCGCTGCCG GGCCGAACAG GCCAGAGCAG ACCTTGCCGA CCTGAACATG GACCTTCCCC TGCCGGTGGC GGGCGCGGTA CAAAAGCCGA GCAGCGCTGA AGCGCTCGGC TGGCTGTTCG TCTCCGAGGG CTCCAAGCTC GGTGCAGCAT TCCTGATCAA ACGTGCCCAG GCCCTGAACC TGAGCGACAG CTTCGGCGCG CGGCACCTGG GCGAGCCTGC CGGAGGCCGG GCTGCAGGCT GGAAAGCCTT TGTCCGAACG CTTGATGAAC TGCCACTGAC TGCCGAACAG GAAGCAGAAC TCGATCGCGG CGCCATCGCC GCATTCGAGC GTTTCAACGT GTTGCTGCAG TGCGCCTACG CCGATGCTCC CGTTGCAGAC ATGGCACAGG CATGA
|
Protein sequence | MPLDQNRPTL RSQRLSQITH APHEQLDKAV KAHAPFDTLA SYSRFVVAQY LFQKELQPLY SDPTLQTIIS DLPARCRAEQ ARADLADLNM DLPLPVAGAV QKPSSAEALG WLFVSEGSKL GAAFLIKRAQ ALNLSDSFGA RHLGEPAGGR AAGWKAFVRT LDELPLTAEQ EAELDRGAIA AFERFNVLLQ CAYADAPVAD MAQA
|
| |