Gene Psyr_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1042 
Symbol 
ID3366536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1177200 
End bp1178102 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID637651385 
Producthypothetical protein 
Protein accessionYP_234136 
Protein GI66044295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.214105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.331945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTT CGCTTTATCT GCTGACCGTG CTGATCTGGG GCACCACCTG GATCGCCCTG 
AAACTTCAAC TCGGCGATGT CGCGATTCCG GTATCGATCG TCTATCGCTT CGCATTGGCG
GCCTTGGTGC TGTTCGCGTT TTTACTGCTG AGCAAGCGGT TGCAACCGGT CAATCGTCGT
GGCCAGTTGA TTTGCCTAGC GCAGGGCGTG TGCCTGTTCT GCGTCAACTT CATGTGCTTC
TACACGGCCA GCCAGTGGAT ACCCAGCGGC CTGATCGCGG TGGTGTTCTC GACCTCGACG
CTGTGGAATG CGCTGAACGC ACGGGTGTTC TTTCGCCAGA AAATCGCTGG CAACGTCATG
GCCGGTGGCG CGATGGGCCT GCTTGGGTTG GCGTGTCTGT TCTGGCCCGA ACTGTCCGGG
CACAGCGCCA GCCGCGAGAC CCTGATCGGG CTGGGCTTGG CCCTGCTGGG CACGCTGTGC
TTCTCGGCGG GCAACATGCT GTCGAGCCTG CAGCAGAAAG CCGGTCTGCG TCCGCTGACC
ACCAATGCGT GGGGCATGTT CTACGGGGCG ACGATACTGG GCATGTATTG CCTGCTGAGT
GGCACGCCGT TCAGCTTCGA ATGGAACACG CGTTATGTAG GCTCACTGCT GTTCCTGGTG
ATCCCCGGCT CGGTGATTGC ATTCACTGCC TACCTGACCC TGGTAGGACG CATGGGCCCG
GAACGCGCGG CTTACTGCAC CGTGCTGTTC CCGATTGTGG CGCTGAACAT CTCGACGTGG
GTCGAAGGCT ACCAGTGGAC GCTGGCGGCC CTGCTGGGGC TGGGGCTGGT GATGGTCGGC
AACGTGCTGG TGTTCAGGAA GGTCAGACCG GTTGCCGTCG TGGTCGGCGG CAAACTGGCC
TGA
 
Protein sequence
MNLSLYLLTV LIWGTTWIAL KLQLGDVAIP VSIVYRFALA ALVLFAFLLL SKRLQPVNRR 
GQLICLAQGV CLFCVNFMCF YTASQWIPSG LIAVVFSTST LWNALNARVF FRQKIAGNVM
AGGAMGLLGL ACLFWPELSG HSASRETLIG LGLALLGTLC FSAGNMLSSL QQKAGLRPLT
TNAWGMFYGA TILGMYCLLS GTPFSFEWNT RYVGSLLFLV IPGSVIAFTA YLTLVGRMGP
ERAAYCTVLF PIVALNISTW VEGYQWTLAA LLGLGLVMVG NVLVFRKVRP VAVVVGGKLA